| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6156 |
|---|
| Symbol | |
|---|
| ID | 5155455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6384588 |
|---|
| End bp | 6386867 |
|---|
| Gene Length | 2280 bp |
|---|
| Protein Length | 759 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640560868 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241987 |
|---|
| Protein GI | 148257402 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.263542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.152054 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAA TCGCTTCGCC CGCCGTCGCC GAACCGTCTG CTGCGCGCAA CCGGCTGGTT
CTCGTCATCT ATACCGCCGC GATCTTCGTC AGCGCGCTGC TGTTGTTCTC GGTGCAGCCG
TTGTTCACCA AGATGGTGCT GCCGCGGCTC GGTGGCTCGC CGGCGGTGTG GTCGGTGGCG
ATGGTGTTCT TCCAGGCCCT GCTGTTGGCC GGCTACGCCT ACGCGCATTT TCTCACGCAG
CTGCGCAGCC GGGTGCTGCC GATCGCCCTT CATCTGCTGC TGCTCGGCTT TGCGCTGCTG
ACCCTGCCGC TGTCGATCTC CAGCCATTGG GGCGATCCGC CAACCTCCGG CTATGCGCTC
TGGCTGCTCG GATTGTTCAC GGTGTCGATC GGCCTGCCGT TCTTCGCGCT CGCCGCCAAC
AATCCCCTGC TGCAGGCCTG GTTCGTGCGG ACCGGACACC CCGCGGGTCC CGATCCCTAT
TTTCTCTATG CGTCGTCGAA TATCGGCAGC TTCCTGGCGT TATTGTCCTA TCCGTTGCTG
ATCGAGCCGA TCTTCAGCCT GCGCATGCAG AACATGATCT GGACCGGCGG CTATGCCGTG
CTGATCGCGC TGATCGCCGG CTGCGGCGTG TTGCTGCTGC GCGCGCCGGT CGCGGTGATG
GCCCTGCTGC CACGTGTGGA CGGCGACGCG CCCGCGCCGA GCTGGCTGTT GCGCGCGCGC
TGGATCTTCC TGGCCGCGGT GCCCTCGGGC CTGCTGATCG CGGTCACCGC GCATATCTCG
ACGGATGTGG CCGCCGCGCC ATTGCTCTGG GTGCTGCCGC TCTCGCTCTA TCTGCTCACC
TGGGTGCTGG TGTTCCAATC GCGGCCGCTG TTGCCGCACA AATGGATGCT GGCGCTGCAG
CCGCTCGCGA TCGCCGGCGT CGTCATGCTG CTTGCCTTCG GCGGCGAGCA GAACCTGGCG
CTCACGCTCG GTGGGCATCA GCTGTGCTTC TTCGTGATCG CGATGGCCTG CCATGGCGAA
CTGGCCCGCA CGCGTCCGGC CGCGAAATAC CTCACCGGCT TCTATGTCGC GCTGTCGTTC
GGCGGCATGG TCGGCGGCCT TTTCGCCGGA TTGATCGCGC CCTACAGTTT CTCCTGGGTC
GCCGAATATC CGATCCTGTT GGCGCTCGCC GCGCTGTGCC GGCCCGGTGA GAAAGCCGAA
CGGCTGCCGC GGATCACGCG CTGGTACTGG ATCGCGCTGG CGATCATCGC CGTCGCGCTG
CTGATGCCGG CGGGGCTGAC CGGCAAGGTC ACGACCTATC TCGCAGATCA CCGCGTCTAT
GTCGCGGGTG CGGTGGGGGC GCTCGCAGCG CTGATCGCGC TGCTGCTCGA TGCCGGCCGC
TGGAAGGTGT TCGCGACGGC TGCGCTCGCG CTGGTCCTGA TCCGCGCCTA TCCGGCCGAT
GACGGCCGCG TCGAAACCGT GCGCAGCTTC TTCGGCGTGC ACAAGATCGT GGTGACCTCG
GACGGGCATT ATCACGTGCT GATGCACGGC ACGACCATCC ACGGCGCGCA GAAATATCTC
AACGCCGACG GCTCCAAGGT GACCGGTCGC CCCGAGCCGA TCACCTATTA TCACAAGGAT
GGCGGCATCG GCCGCGCCAT CACCGCGATC CGCGAGCGCA AGGGCGCGCC GCTCAAGGTG
GCCGTGATCG GCGTCGGCAG CGGCACGCTG ACCTGCGCCG CCGAGCCCGG CGAGAACTGG
AAGTACTTCG AGATCGACCA GACCATGGTC GATACCGCCA GCGATCCGAA ATATTTCAGC
TACATCAAGA GCTGCGCGCC CGACTTCAAG CCCGTTATCG GCGATGCGAG GCTCACCTTC
GCCAAGGAGC CGGATGGCGT CTACGACCTC ATCATCGTCG ATGCCTATTC GTCGGACGCG
ATCCCGATCC ACCTTGCCAC AGAAGAGGCG ATGGCCATCT ACAAGGCCAA GCTGGCGCCG
CAGGGGGCCG TGGTGATGCA CGTCTCCAAC CGCCATCTGG AGCTCGAGAG TGTCGTGGTC
GGCATCGCCG ACGCCAACGA CATGAAAAGC TGGGTCTACA ACGAGGACTC CGGCCGCGAC
GACGAGTACA TCTTCTCGAC GGACGTCGTG GTCAGCGCGC GCGAGGAGGC CGATGTCGGC
AAGCTCGCCT CATCTGACAA ATGGACCGAA ACCGAGCCGA CCGATGGTGA GCGCGTCTGG
ACCGACGACT ATTCGAACAT TCTCGGCGCG GTGTATCGAC GATTGCGCGA CGGCGAATAG
|
|---|
| Protein sequence | MTSIASPAVA EPSAARNRLV LVIYTAAIFV SALLLFSVQP LFTKMVLPRL GGSPAVWSVA
MVFFQALLLA GYAYAHFLTQ LRSRVLPIAL HLLLLGFALL TLPLSISSHW GDPPTSGYAL
WLLGLFTVSI GLPFFALAAN NPLLQAWFVR TGHPAGPDPY FLYASSNIGS FLALLSYPLL
IEPIFSLRMQ NMIWTGGYAV LIALIAGCGV LLLRAPVAVM ALLPRVDGDA PAPSWLLRAR
WIFLAAVPSG LLIAVTAHIS TDVAAAPLLW VLPLSLYLLT WVLVFQSRPL LPHKWMLALQ
PLAIAGVVML LAFGGEQNLA LTLGGHQLCF FVIAMACHGE LARTRPAAKY LTGFYVALSF
GGMVGGLFAG LIAPYSFSWV AEYPILLALA ALCRPGEKAE RLPRITRWYW IALAIIAVAL
LMPAGLTGKV TTYLADHRVY VAGAVGALAA LIALLLDAGR WKVFATAALA LVLIRAYPAD
DGRVETVRSF FGVHKIVVTS DGHYHVLMHG TTIHGAQKYL NADGSKVTGR PEPITYYHKD
GGIGRAITAI RERKGAPLKV AVIGVGSGTL TCAAEPGENW KYFEIDQTMV DTASDPKYFS
YIKSCAPDFK PVIGDARLTF AKEPDGVYDL IIVDAYSSDA IPIHLATEEA MAIYKAKLAP
QGAVVMHVSN RHLELESVVV GIADANDMKS WVYNEDSGRD DEYIFSTDVV VSAREEADVG
KLASSDKWTE TEPTDGERVW TDDYSNILGA VYRRLRDGE
|
|---|
| |