Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6150 |
Symbol | |
ID | 5149649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6378260 |
End bp | 6379021 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640560862 |
Product | putative ABC-2 type transporter (permease protein) |
Protein accession | YP_001241981 |
Protein GI | 148257396 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00809538 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0938496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGC GGGCAGTCGG CGCAATCTAC AAATTCGAGA TGGCGCGCAC CTGGCGCACG ATCCTGCAGA GCATCGTGTC GCCGGTCGTA TCCACCTCGC TGTATTTCGT GGTGTTCGGC GCCGCGATCG GCTCGCGGAT CAGCGAGGTC CAAGGCGTCA GCTATGGCAC CTTCATCGTT CCGGGCCTGG TGATGCTGTC GGTGCTGACC CAGAGCATCG CAAACGCCTC GTTCGGGATC TACTTCCCGA AATTCATCGG CACGATCTAC GAGATCCTGT CGGCGCCGAT CTCGCATTTC GAGATCGTGC TCGGCTATGT CGGCGCAGCC GCCACCAAAT CGATCGTTCT CGGGCTGATC ATCCTGGCCA CGGCCGGGTT GTTCGTGCCG CTGCACATCC AGCATCCGGT CTGGATGCTG ACCTTCCTGG TGCTGACCGC CATCACCTTC AGCCTGTTCG GCTTCATCAT CGGCATCTGG GCCGATGGTT TCGAGAAGCT GCAGATGATC CCGATGCTGG TGGTGACGCC GCTAACCTTC CTGGGCGGCA GCTTCTATTC GGTCAACATG CTGCCGCCGA CCTGGCACAC GATCGCGCTG CTCAATCCGG TGGTCTACCT GATCTCCGGT TTTCGCTGGA GCTTCTACGA GATCGCCGAC GTCAGGGTGG AGATCAGCGT CGCCATGACG CTGGGCTTCC TCGTGATCTG CATGTCGATC ATCTGGTGGA TCTTCAAGAC CGGTTACCGG CTCAAGCATT GA
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Protein sequence | MNLRAVGAIY KFEMARTWRT ILQSIVSPVV STSLYFVVFG AAIGSRISEV QGVSYGTFIV PGLVMLSVLT QSIANASFGI YFPKFIGTIY EILSAPISHF EIVLGYVGAA ATKSIVLGLI ILATAGLFVP LHIQHPVWML TFLVLTAITF SLFGFIIGIW ADGFEKLQMI PMLVVTPLTF LGGSFYSVNM LPPTWHTIAL LNPVVYLISG FRWSFYEIAD VRVEISVAMT LGFLVICMSI IWWIFKTGYR LKH
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