Gene BBta_6149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6149 
Symbol 
ID5149648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6377343 
End bp6378263 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content63% 
IMG OID640560861 
Productputative ABC transporter (ATP binding protein) 
Protein accessionYP_001241980 
Protein GI148257395 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.397223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.143638 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCCG TCATATCCGT TTCCGGCCTG TCGAAGACCT ATGCGTCGGG CTTCACCTCG 
CTGAACAATA TCCATCTTGA GATCGCGCGC GGCGAGATCT TCGCGCTGCT CGGCCCGAAT
GGCGCCGGCA AGACCACCCT GATCAGCATC ATCTGCGGCA TCGTCAATGC GTCGTCCGGC
CAGGTCGCCG TCGGCGGTCA CGACATCAAC GCCGACTATC GCGCCGCGCG GGCCTTGATC
GGGCTGGTGC CGCAGGAGCT GCACACCGAT TCGTTCGAAA GCGTCTGGGC GACGGTGAGC
TTCAGCCGCG GCCTGTTCGG CAAGCCGAAG AACCCGGCCT TGATCGAGAA GATTCTCAAG
GATCTTTCGC TGTGGGACAA GAAGGATGCC AAGATCATCA CGCTGTCCGG CGGGATGAAG
CGGCGCGTGA TGATCGCGAA GGCGCTGTCG CACGAGCCGC AGGTGCTGTT CCTGGACGAG
CCGACCGCAG GCGTCGACGT CGAGCTGCGC AAAGGCATGT GGGACGTCGT GCGTGAGCTG
AAGGCCGCCG GCGTCACGAT CATCCTGACC ACGCATTACA TCGAGGAAGC CGAGGAGATG
GCCGACCGGG TCGGCGTCAT CAACAAGGGC GAGATCGTGC TGGTCGAGGA CAAGGCCAAG
CTGATGCAGA AGCTCGGCCG CAAGCGGCTG AGCCTGCATC TGCAGCAGCG CATCGATGCC
ATTCCGGAGG CGCTCGCACC CTATCATCTG ACCCTGTCGG AGGACGGCTG GCGGCTCGCT
TATGACTACG ACACCAAGGG CGACCGCACC GGCATCACCA GCCTGCTCGG CGATCTCAGG
GCCGCCGGCA TCCGCTTCGT CGACCTCGAA ACCAAGCAAT CGTCCCTGGA GGACATCTTC
GTGAGCCTGG TGCGGCAATG A
 
Protein sequence
MAPVISVSGL SKTYASGFTS LNNIHLEIAR GEIFALLGPN GAGKTTLISI ICGIVNASSG 
QVAVGGHDIN ADYRAARALI GLVPQELHTD SFESVWATVS FSRGLFGKPK NPALIEKILK
DLSLWDKKDA KIITLSGGMK RRVMIAKALS HEPQVLFLDE PTAGVDVELR KGMWDVVREL
KAAGVTIILT THYIEEAEEM ADRVGVINKG EIVLVEDKAK LMQKLGRKRL SLHLQQRIDA
IPEALAPYHL TLSEDGWRLA YDYDTKGDRT GITSLLGDLR AAGIRFVDLE TKQSSLEDIF
VSLVRQ