| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6141 |
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| Symbol | uvrD |
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| ID | 5156158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6368875 |
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| End bp | 6371442 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560853 |
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| Product | ATP-dependent DNA helicase Rep |
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| Protein accession | YP_001241972 |
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| Protein GI | 148257387 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0790722 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CCAACCGCGT GAGCCCCTTT CCTGCGCCTG ACCACCAGCC CGTCGCCGGC
GGTATCGCCG CGCGTGCGCG TGCCGCCGCG TCGGTGGGCG CACGCTATCT CGCGGGCCTC
AATCCGGAGC AGCGCGACGC GGTCGAGACG CTGGATGGCC CTGTCCTGGT GCTGGCCGGG
GCAGGCACCG GCAAGACCCG CGTGCTCACC ACCCGCATCG CGCATATTCT GAGCCAGGGC
CGGGCGCGCC CCGGCGAGAT CCTGTCGGTG ACCTTCACCA ACAAGGCGGC GCGTGAGATG
AAGACACGTC TCGCCGAGAT GCTCGGACAG GCGGTCGAAG GCATGCCTTG GCTCGGCACC
TTCCACTCGA TCGCCGGGCG CATCCTGCGC AGCCATGCCG AGCTGGTGCA GCTGAAATCC
AACTTCACCG TGCTCGACGT CGATGACCAG ATCCGCCTCC TCAAGCAGCT GCTGCAGGCC
GAAAACATCG ACGACAAAAG GTGGCCGGCG CGCATGCTGG CCGGCCTGAT CGATGGCTGG
AAAAACCGCG GCCTGATGCC GTCGCAGGTG CCGCCCGGCG AAGCCGCCGT GTTCGGCAAC
GGCAAAGGCG GCAAGCTCTA TGCGAGCTAT CAGGAGCGGC TGAAGATCCT CAACGCCGCC
GATTTCGGCG ACCTGCTGCT CGAAAACATC CGGCTGTTCC GCGAGCACCC CGATGTGCTC
AGGCAGTATC AGAGCCGCTT CAAGTTCATC CTGGTCGATG AGTATCAGGA CACCAATGTT
GCGCAGTACC TCTGGCTGCG GCTCCTGTCG CAGGCGCCGT CCTCCGGTTC GTCATTGCCG
GGCTCGCCCC GACCATCCAT TGCTTCTTCA GAGGATGGAT CACCGGCTCT CGACGCTGCG
CGTCGGCCCG GCGATGACGA CAAGAGCGTT GCGGTCGCTG GCCCCGCCCC CAAGAACATC
TGCTGCGTCG GCGACGACGA CCAGTCGATC TATGGCTGGC GCGGCGCCGA GGTCGACAAC
ATCCTGCGCT TCGAGCACGA CTTTCCCGGC GCCAAGGTGA TCCGGCTGGA GCGCAATTAT
CGCTCGACGG CGCATATTCT CGCCGCGGCC TCGCATCTGA TCACGCACAA TGAAGGACGC
CTCGGCAAGA CCCTGCGCAC CGAGGATGTC GAGGGCGAGA AGGTCACGGT CACCGGCGCC
TGGGATTCGG AGGAAGAAGC GCGCGGCATC GGCGAGGAGA TCGAGGAGCT GCAGCGCAAG
GGCGAACCGC TCAACGACAT CGCGATCCTG GTGCGCGCCT CGTATCAGAT GCGCGAGTTC
GAGGACCGCT TCGTCACGCT CGGCCTGCCC TATCGCGTCA TCGGCGGCCC GCGCTTCTAT
GAGCGCGCCG AGATCCGCGA CGCGTTGGCC TATCTGCGCG TCATCAATTC GCCGGCCGAC
GATCTCGCCT TCGAGCGCAT CATCAACGTG CCGAAGCGCG GGCTCGGCGA TGCCACCGTG
CAGATGCTGC ACGACCACGC CCGCAAGCGC CGCATCCCGC TGTTCGAAGC GGCGCGCGCG
GTGGTCGAGA CCGACGAGCT GAAGCCGAAG GCGCGCGGGT CGCTGCGCGG GCTGATCCTG
CAGTTCGAGC GCTGGCGCAC CCAGCGCGAG GTGACACCGC ACACCGAGCT CGCAGAGATC
GTGCTCGACG AGAGCGGCTA TACCGAGATG TGGCAGAAGG ACCGCTCGGC CGACGCCGCT
GGGCGGCTCG ACAATTTGAA AGAGCTCATC CGTTCGATGG AGGAGTTCGA GAACCTGCAT
GGCTTCCTCG AGCACATCTC GCTGGTGATG GACCGCGAGG GCGCGGCCGA CGAGGACGCG
GTCTCGTTGA TGACCTTGCA CTCGGCCAAG GGATTGGAGT TCGACAACGT GTTCCTGCCG
GGCTGGGAGG AAGGCCTGTT CCCGAGCCAA CGCACGCTCG ACGAACAGGG CCGCGCCGGG
CTCGAAGAGG AGCGTCGCCT CGCCCATGTC GGCCTGACGC GCGCGCGGCG ACGCGCCAAG
ATCTATTTTG CCACCAACCG CCGCATTCAC GGCACCTGGA CCACGACCAT CCCGTCGCGC
TTCCTGGATG AACTGCCGGC CGACAGCGTC GAGATCACGG AATCCAAGGG CGGTTCCGGC
TGGGGCGGCG CCGGCGGCTA CGGTCCGTCG CGGTTCGACA ATGTCGAATC GTTCGGGTCG
AGCTATTCCA CGCCGGGCTG GCAGCGCGCG CAGGCGCGGC GCCCTGCGTC ACGAGGCGCT
TCGGAGGGCG GCTTCCAGGA GGAGCCATCG CCGTTCGCGG GGCGCGATCC GTTCGGCGGC
AGCTTCGGCG GTCCATTCGG CCGCAACAAA CGCGGGCCGC TGACGATCGA GGGCGAGCTG
GTCGCGAAGT CCACCGGAAC AACCTCCGAA TTCGCGCTCG GCGACCGCGT GTTTCACCAG
AAGTTCGGCT ATGGCAAAGT GGTCAGGGTC GATGGCAACA AGCTGACCAT CGCCTTCGAC
AAGGCCGGCG AGAAGAAGGT CGTCGACAGC TTCGTCGAGC GGGCGTGA
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| Protein sequence | MTEPNRVSPF PAPDHQPVAG GIAARARAAA SVGARYLAGL NPEQRDAVET LDGPVLVLAG
AGTGKTRVLT TRIAHILSQG RARPGEILSV TFTNKAAREM KTRLAEMLGQ AVEGMPWLGT
FHSIAGRILR SHAELVQLKS NFTVLDVDDQ IRLLKQLLQA ENIDDKRWPA RMLAGLIDGW
KNRGLMPSQV PPGEAAVFGN GKGGKLYASY QERLKILNAA DFGDLLLENI RLFREHPDVL
RQYQSRFKFI LVDEYQDTNV AQYLWLRLLS QAPSSGSSLP GSPRPSIASS EDGSPALDAA
RRPGDDDKSV AVAGPAPKNI CCVGDDDQSI YGWRGAEVDN ILRFEHDFPG AKVIRLERNY
RSTAHILAAA SHLITHNEGR LGKTLRTEDV EGEKVTVTGA WDSEEEARGI GEEIEELQRK
GEPLNDIAIL VRASYQMREF EDRFVTLGLP YRVIGGPRFY ERAEIRDALA YLRVINSPAD
DLAFERIINV PKRGLGDATV QMLHDHARKR RIPLFEAARA VVETDELKPK ARGSLRGLIL
QFERWRTQRE VTPHTELAEI VLDESGYTEM WQKDRSADAA GRLDNLKELI RSMEEFENLH
GFLEHISLVM DREGAADEDA VSLMTLHSAK GLEFDNVFLP GWEEGLFPSQ RTLDEQGRAG
LEEERRLAHV GLTRARRRAK IYFATNRRIH GTWTTTIPSR FLDELPADSV EITESKGGSG
WGGAGGYGPS RFDNVESFGS SYSTPGWQRA QARRPASRGA SEGGFQEEPS PFAGRDPFGG
SFGGPFGRNK RGPLTIEGEL VAKSTGTTSE FALGDRVFHQ KFGYGKVVRV DGNKLTIAFD
KAGEKKVVDS FVERA
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