| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6135 |
|---|
| Symbol | |
|---|
| ID | 5150457 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6363478 |
|---|
| End bp | 6364977 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640560847 |
|---|
| Product | putative amidase |
|---|
| Protein accession | YP_001241966 |
|---|
| Protein GI | 148257381 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0320025 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTCC ATGATTATGT GCAGCGCGAC GCAACGGCGC TGGCTGACGC GGTCAGGACA
GGTGAGACCA CGGCGGCCGA GCTGCTGCAG CTCGCCCTGC AGCAGAGCGA GCGGGCGCAG
CCGAAGACCA ACGCGATCTG CAAGCTGATG GAGCGCGAGG CGCGCACGCA GCTGACCAGG
CTCGCAGCCG GCCCCTTTGC CGGCGTGCCG TTTCTGATCA AGGACTGCGC GCAGGACTAT
GCCGGCCTGC CGACGGCCTG TGGCAGCAAG GCGCTGTCCG GTGTCGTCGC CGCTGAGCAT
GCGCATGTCG TGCGGCGCTA TATCGAGGCC GGCCTTGTGA TCTTCGGCAA GACCAATCTT
CCGGAGCTGG CGCTGAAGGG CGTGTCCGAC TCGCGCGCCT TCGGCCGCGT CAACAATCCC
TGGAATGCGG CGCATGTGTC CGGCGGTTCG AGCGGCGGCG CGGCAGCGGC CGTCGCCTCC
GGCGTGGTGC CGATGGCCGC CGGCAATGAC GGCGGCGGCT CCATTCGCAT TCCCGCCGCC
TGCTGTGGCC TGTTTGGACT GAAGCCGTCG CGCGGCCGGG TGTCCTCCGG GCCGGGCTTC
GGCGAATATT GGTACGGCGC CTCCAGCGAA GGCGTGATCT CGCGCAGTGT GCGCGACACG
GCGCTGGCGC TCGACGTCAT CACCGGGCCC GAGCCTGGCG ATCCGTTTCT CGTGGCCGAG
CCTGGCGTGG TGTTCGCGAA CGCCGTGACG CGTGATCCGC CGCGCCTGCG CATCGGTGTC
ACGACGGCCT CACCGATCGG CATGGCAGTT CATGCCGAGG CGAAGCTTGC GACCGAGAAT
GCCGTCAAAC TGCTGCAGGG CCTCGGCCAT GAGGTCGAGG AGGCGACGCC CGCCATCGAT
GGCGGCGCGC TCGCGACCTC GTTCCTGCAC ATCTATTTCG GCCAGGTGGC GGCGCTGGTG
GCGGAGGCGC GCGCCAAAGG CGCCGGGCGC GCGGAGTTCG AGCTGCTGAC ACGGGTGCTG
GCGACGCTCG GCGGGGCGGT CTCCGCCGGC GCGTTGACGA CGCAGCTATT GAAATGGAAC
GGCTTCGCCC GCGCGCTGGC GCGTTTCCAT GCGCGCTACG ACATGCTGCT GACGCCGACT
TTGGCGCATC CGCCGGTGCG CCACGGCCAG GGCGATCCGA CGGCGGCCGA GCAGATATTG
CTCGACATGC TCGATCGCGT CGGCCTGCTC GGATTGCTGA CGCGCTTAGG CTGGCTCGAC
GGCATGATCG ACAAGATCGC CCGCGACAGC CTGCAATATG TGCCGTTCAC CCAGCTCGCT
AATCTGACCG GCACGCCGGC GATGAGCGTG CCGCTGCATT GGACCGCCGA GGGCCTGCCG
CTCGGCGTCC AGTTCACGGG TCGGCTGGGC GATGAAGTCC GGCTGCTGCA GCTCGCTCGT
CAGCTCGAGC AGGCGCAGCC TTGGTTCGAC CGCCTGCCGG ACTGGGTGCG TTCGGGCTGA
|
|---|
| Protein sequence | MSVHDYVQRD ATALADAVRT GETTAAELLQ LALQQSERAQ PKTNAICKLM EREARTQLTR
LAAGPFAGVP FLIKDCAQDY AGLPTACGSK ALSGVVAAEH AHVVRRYIEA GLVIFGKTNL
PELALKGVSD SRAFGRVNNP WNAAHVSGGS SGGAAAAVAS GVVPMAAGND GGGSIRIPAA
CCGLFGLKPS RGRVSSGPGF GEYWYGASSE GVISRSVRDT ALALDVITGP EPGDPFLVAE
PGVVFANAVT RDPPRLRIGV TTASPIGMAV HAEAKLATEN AVKLLQGLGH EVEEATPAID
GGALATSFLH IYFGQVAALV AEARAKGAGR AEFELLTRVL ATLGGAVSAG ALTTQLLKWN
GFARALARFH ARYDMLLTPT LAHPPVRHGQ GDPTAAEQIL LDMLDRVGLL GLLTRLGWLD
GMIDKIARDS LQYVPFTQLA NLTGTPAMSV PLHWTAEGLP LGVQFTGRLG DEVRLLQLAR
QLEQAQPWFD RLPDWVRSG
|
|---|
| |