Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6133 |
Symbol | |
ID | 5150455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6361475 |
End bp | 6362896 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560845 |
Product | putative D-lactate dehydrogenase (D-lactate ferricytochrome C oxidoreductase) |
Protein accession | YP_001241964 |
Protein GI | 148257379 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0750595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGACGA CTCTTCCCCA TCACGACCTG AAGCGGCCGG CGCCGGAGGC GCTGAAAAGC GCGCTCGACG CGCTCGCGGC GCGCTTCGGC AACAGGCTGA TCACCTCGCA GGCCGTGCGC GAGCAGCATG GCCATACCAC GACCTGGCTG CCGACGCAGC CGCCGGATGG CGTGGTGCTG GCGCAGGAGA CCGCCGACAT CCAGGACGTC GTCCGCATCT GCGCTGCCCG TGGCGTGCCG ATCATTCCGT TCGGCACCGG CACCTCGCTC GAGGGCCAGG TCAACGCGCC GGCCGGCGGC ATCTGCATCG ACCTGCGCGA CGTGAACAAG GTGCTCGAGG TGCATGCCGA GGATCTCGAC TGCGTGATCC AGCCCGGCAT CACCCGCAAG ACGCTCAACG AATATCTCCG CGACCAGGGC CTGTTCTTTC CGATCGATCC CGGCGCCGAC GCTTCGCTCG GCGGCATGGC CTCGACCCGG GCCTCCGGCA CCAACGCCGT GCGCTACGGC ACCATCCGCG AGAACGTGCT GGCGCTGAAG GTCGTGCGGG CTGACGGCGA AATCATCAAG ACCGGCACCC GCGCCAAGAA ATCGGCGGCC GGCTACGATC TGACGCATCT GTTCATCGGC GCCGAGGGCA CGCTCGGCAT CATCTGCGAG ATGACGATCC GGCTGCGCGG CATTCCCGAG ACCATCGCTG CGGCCGCATG CTCGTTTGAA ACGGTGCGCG GGGCTTGTCA GGCGACCATC CTGGCGATCC AGACCGGCAT CCCGGTGGCG CGCATCGAAC TGCTCAATGC CGCGCAGGTC AAGGCCTGCA ACGCCTATTC GAAGCTGACC CTGCCGGAGA CGCCGCTGCT GCTCTTGGAG TTCCATGGCA GCGAGGCCGA GGTCGCCGAA CAGTCGAAGA ATTTTGCGGA GATCGCCGCC GAATGCGGTG GCGGTGAGTT CAGCTGGACC ACGAAGCCCG AGGATCGCAC CAAGCTGTGG CAGGCGCGCC ACGACGCCTA TTGGTCCGTG AAGGCCATCC GGCCGGGCGC CGGCGTGGTT GCGACCGATG TCTGCGTGCC GATCTCGCGG CTGGCCGATT GTGTCGGCGA GACCGAGGAG GATCTCGCGC GTCTCAATCT GACCTCGCCG ATCGTCGGCC ATGTCGGCGA TGGCAATTTC CACTGCTCGC TGATGTGCGA TGTCGACGAC GCCGGCGAGA TGGCGCGTGG CGAGGAGTTC ATGCATCGGC TGGTCGAGCG CGCCCAGGCG ATGGGCGGCA CCTGCACCGG CGAGCATGGC ATCGGCCAGG GCAAGCAGAA ATACCTCAAA TCCGAACTCG GCGAGGAAGC CCTCGATGCG ATGCGGGCGG TGAAGAAGGC GCTCGATCCG CAGAACATCT TCAATCCCGG CAAGATCATT CCGGCGAACT GA
|
Protein sequence | MATTLPHHDL KRPAPEALKS ALDALAARFG NRLITSQAVR EQHGHTTTWL PTQPPDGVVL AQETADIQDV VRICAARGVP IIPFGTGTSL EGQVNAPAGG ICIDLRDVNK VLEVHAEDLD CVIQPGITRK TLNEYLRDQG LFFPIDPGAD ASLGGMASTR ASGTNAVRYG TIRENVLALK VVRADGEIIK TGTRAKKSAA GYDLTHLFIG AEGTLGIICE MTIRLRGIPE TIAAAACSFE TVRGACQATI LAIQTGIPVA RIELLNAAQV KACNAYSKLT LPETPLLLLE FHGSEAEVAE QSKNFAEIAA ECGGGEFSWT TKPEDRTKLW QARHDAYWSV KAIRPGAGVV ATDVCVPISR LADCVGETEE DLARLNLTSP IVGHVGDGNF HCSLMCDVDD AGEMARGEEF MHRLVERAQA MGGTCTGEHG IGQGKQKYLK SELGEEALDA MRAVKKALDP QNIFNPGKII PAN
|
| |