| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6129 |
|---|
| Symbol | |
|---|
| ID | 5150738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6357765 |
|---|
| End bp | 6358682 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640560841 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001241960 |
|---|
| Protein GI | 148257375 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.111933 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTTGACC GGCTGACAGG GCTGGAAGTC CTCTCGAAGG TGGCCGGATC CGGCAGCCTG
TCCGGAGCGG CACGGCTGCT CGGCATGTCT CCGACCATGG TCACCAAGCA CCTCGCAGCG
CTCGAAGCGC GGCTCGGCGC CAAGCTGTTT CACCGCACCA CGCGGCGGCT GACCATCACC
GAGGCGGGGC GGCGCTATCT CGACCTCGCC GAACGCGTGC TCGGCGATTT CGAGGCGGCC
GAGAGCGCGA TCGCGGCCGA CCGCGTCGAG CCGCGCGGAC TGTTGCGGCT GAACGTCCCG
CTGGCGTTCG GCACGCGTCA AATCGCGCCG CTGCTCGCCC GCTTTGCCGC GCTGTATCCC
GGTGTCAGCG TCGAGCTCGG GCTGAACGAC CGGCTGGTTG ACCTGATCGA GGAAGGCTGG
GACCTCGCGA TCCGGATCGG CACGCTGAAG GACTCCAGCC TGGTGGCGCG GCGGCTCGCG
CCGTGCCGGA TGATGATCTG CGCCGCGCCG TCCTATCTCG AGGCGCATGG CACGCCGCGC
CGGACGGCCG ATCTCGCCGA CCATAATTGT CTCGGTTACA CCCTGGCAGC GGCGGGCCCT
TCGCGCTGGC GCATGGGCGG CAAGACGGCG ATCGATGTGA CCGTGAGCGG CAATCTGCGC
GCCAACAATG GCGATGCGCT GCTCGCCGCC GCGCTGGCTG GCCAAGGCCT GATCTACCAG
CCGACCTTCA TCGTCGGCGA CGAGGTGCGC GCCGGACGAT TGGTGCCGTT GAGGCTGGAT
GTTCCGCCGT CGGAGCTTTT GGCGGTTCAC GCCGTCTACC TGCCGGACCG CACGCCGTCG
GCCAAGGTGC GCGCCTTCAT CGATTACCTC GCGGCGGCCT TCGCTCCGGA GCCACCATGG
GATCGCGACC TTGCGTGA
|
|---|
| Protein sequence | MLDRLTGLEV LSKVAGSGSL SGAARLLGMS PTMVTKHLAA LEARLGAKLF HRTTRRLTIT
EAGRRYLDLA ERVLGDFEAA ESAIAADRVE PRGLLRLNVP LAFGTRQIAP LLARFAALYP
GVSVELGLND RLVDLIEEGW DLAIRIGTLK DSSLVARRLA PCRMMICAAP SYLEAHGTPR
RTADLADHNC LGYTLAAAGP SRWRMGGKTA IDVTVSGNLR ANNGDALLAA ALAGQGLIYQ
PTFIVGDEVR AGRLVPLRLD VPPSELLAVH AVYLPDRTPS AKVRAFIDYL AAAFAPEPPW
DRDLA
|
|---|
| |