Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6112 |
Symbol | |
ID | 5152610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6338621 |
End bp | 6339544 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560826 |
Product | transcriptional regulator |
Protein accession | YP_001241945 |
Protein GI | 148257360 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.824632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.415957 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAAT CAGACGTCAG CATCGCGCAT ATGCGCAGCT TCGTCCGGGT CGCCGAGCGC GGCAGCCTGT CGGCAGTGGC GCGCGAGCTC GGCGTCGGGC AGTCCACCAT CACCCGCCAT CTGCACGAGT TGGAGGAGAC CGTCGGCGTG CCGCTGCTCA GCCGCACCAC GCGGCGGGTG ACGCTGACCG ACGAAGGCAG CCGCTACTAC ACCAACTGCG TTCAGATCCT GCGGCTGATC GAGCAGGCCG GCGATGAAGC GCGCGGCACG CGCGGCGCGC CCAGCGGCAT CATCCGCATT TCCTGCACGG CAGCGTTCGG CATCCTGCAC ATCACGCGGC TCATCTTCGC GTTCCAGGAC CGCTACCCCG ACATTGCTGT TGACCTCAAC CTGACCGACG AACGCATCGA CCTCGTCCGC GACGGTGTCG ATATCGCGCT GCGTCTCGCA CCGCTCTCCG ACAGCTCCTT GAAGCTGCGG TCGCTCGGCC ACTCACACCG GCTGCTGGTC GCGTCTCCCG ACTATTTGGC GAGGCGCGGC ACGCCGCGTA CGCCGCAGGA CCTGATCGGC CATGACGGCA TCCGCATGAC CAACGTCGCG GGCAGCGAGA CGCTTGTCGT CCTGGGACCC GACGGAGAAC GACATGAGGT GCCGTTCAGA GGCAGCTTCC GCACCGATCA CGGGCTCGGG GTTCGAGAGG CTGTGCTGTC GGGACGCGGA ATCGGCGGCA GCCATGCCTG GCTGGTCGAT GACCTCATTG CGGCGGGCAG GCTGACGGTG ATCCTGCCCG ACCACCGTCT GCCATCGGCT CCGCTCAACA TGCTGATCGT CCCCGAGCGC GCCGGCATCG CGCGCGTGCG GCTCATGATC GACTATCTCG CCGCGGAGGT CGTCCGCCTG CCGGGGATCC AGCCAGAGCC CTGA
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Protein sequence | MDKSDVSIAH MRSFVRVAER GSLSAVAREL GVGQSTITRH LHELEETVGV PLLSRTTRRV TLTDEGSRYY TNCVQILRLI EQAGDEARGT RGAPSGIIRI SCTAAFGILH ITRLIFAFQD RYPDIAVDLN LTDERIDLVR DGVDIALRLA PLSDSSLKLR SLGHSHRLLV ASPDYLARRG TPRTPQDLIG HDGIRMTNVA GSETLVVLGP DGERHEVPFR GSFRTDHGLG VREAVLSGRG IGGSHAWLVD DLIAAGRLTV ILPDHRLPSA PLNMLIVPER AGIARVRLMI DYLAAEVVRL PGIQPEP
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