Gene BBta_6112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6112 
Symbol 
ID5152610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6338621 
End bp6339544 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID640560826 
Producttranscriptional regulator 
Protein accessionYP_001241945 
Protein GI148257360 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.824632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.415957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAT CAGACGTCAG CATCGCGCAT ATGCGCAGCT TCGTCCGGGT CGCCGAGCGC 
GGCAGCCTGT CGGCAGTGGC GCGCGAGCTC GGCGTCGGGC AGTCCACCAT CACCCGCCAT
CTGCACGAGT TGGAGGAGAC CGTCGGCGTG CCGCTGCTCA GCCGCACCAC GCGGCGGGTG
ACGCTGACCG ACGAAGGCAG CCGCTACTAC ACCAACTGCG TTCAGATCCT GCGGCTGATC
GAGCAGGCCG GCGATGAAGC GCGCGGCACG CGCGGCGCGC CCAGCGGCAT CATCCGCATT
TCCTGCACGG CAGCGTTCGG CATCCTGCAC ATCACGCGGC TCATCTTCGC GTTCCAGGAC
CGCTACCCCG ACATTGCTGT TGACCTCAAC CTGACCGACG AACGCATCGA CCTCGTCCGC
GACGGTGTCG ATATCGCGCT GCGTCTCGCA CCGCTCTCCG ACAGCTCCTT GAAGCTGCGG
TCGCTCGGCC ACTCACACCG GCTGCTGGTC GCGTCTCCCG ACTATTTGGC GAGGCGCGGC
ACGCCGCGTA CGCCGCAGGA CCTGATCGGC CATGACGGCA TCCGCATGAC CAACGTCGCG
GGCAGCGAGA CGCTTGTCGT CCTGGGACCC GACGGAGAAC GACATGAGGT GCCGTTCAGA
GGCAGCTTCC GCACCGATCA CGGGCTCGGG GTTCGAGAGG CTGTGCTGTC GGGACGCGGA
ATCGGCGGCA GCCATGCCTG GCTGGTCGAT GACCTCATTG CGGCGGGCAG GCTGACGGTG
ATCCTGCCCG ACCACCGTCT GCCATCGGCT CCGCTCAACA TGCTGATCGT CCCCGAGCGC
GCCGGCATCG CGCGCGTGCG GCTCATGATC GACTATCTCG CCGCGGAGGT CGTCCGCCTG
CCGGGGATCC AGCCAGAGCC CTGA
 
Protein sequence
MDKSDVSIAH MRSFVRVAER GSLSAVAREL GVGQSTITRH LHELEETVGV PLLSRTTRRV 
TLTDEGSRYY TNCVQILRLI EQAGDEARGT RGAPSGIIRI SCTAAFGILH ITRLIFAFQD
RYPDIAVDLN LTDERIDLVR DGVDIALRLA PLSDSSLKLR SLGHSHRLLV ASPDYLARRG
TPRTPQDLIG HDGIRMTNVA GSETLVVLGP DGERHEVPFR GSFRTDHGLG VREAVLSGRG
IGGSHAWLVD DLIAAGRLTV ILPDHRLPSA PLNMLIVPER AGIARVRLMI DYLAAEVVRL
PGIQPEP