| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6069 |
|---|
| Symbol | |
|---|
| ID | 5155102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6292060 |
|---|
| End bp | 6292935 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640560781 |
|---|
| Product | putative glycine betaine/carnitine/choline ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001241902 |
|---|
| Protein GI | 148257317 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAGGTC CGATCGGGCG GGCCCTTGCC CTCCCCTGGG AGGGGGAGCA GCGCGCGAGC
TTCGAGATCG CCAAAGGCCG CATGCAGCCC ACGCCCCTGA TCAGCTACGA TCGCGTCCAC
AAGACCTTTG CCGGCCCGGC AGGCGCGGTG GCTGCGGTCG ACGACGTCTC GCTGGACATC
GCCGAGGGCG AGTTCCTGGC GATCGTCGGC AGCTCCGGCT CGGGCAAGAC GACGCTGCTG
CGGCTCGCCA ACCGGCTGAT CGAGCCGGAT GGCGGCAGCA TCCGCATCGC TGGCGAGGAC
ATCAGCTGCC TCGAACCGGT CGCCCTGCGC CGGCGCATCG GCACCGTGTT CCAGAACGGC
GCGCTGTTTC CGCACATGAC GGTTGCGGCC AATATCGGCA TCACGCCCCG GCTGCTGGGG
ACAGCGCCCA AGGCGGTCGC CGCCCGCGTC GACGAACTGC TCGACCTCGT CCAGCTCGAC
CGCGCCGCCC ATCGCAACCG CCTGCCGGAT GCGCTCTCCG GCGGTCAGCG CCAGCGCGTC
GGCGTGGCGC GCGCGCTGGC CGCGGGTCCC CGCATCGTGC TGATGGACGA GCCGTTCGGC
GCGCTCGATC CGCTGACCCG CGACACGCTC GGCAGCGACT ACCGCGCCCT GCATGCGCAG
CTCGGGCTGA CGACGGTGAT GATCACCCAT GACATCACCG AGGCGCTGCT GCTCGCCGAC
CGCATCGCGG TGATGCGCAG CGGGCACCTG GTCGAGGCCG GCACGCCAGC CGCGCTCGCC
GCCAGCCGCG AGCCTTACGT GGCGGAGCTG ATGACCACGC CGCGCCGCCA GGCCGCACGC
CTCGCCGCGC TGCTGCCCGA GAGCGGCGCG GCATGA
|
|---|
| Protein sequence | MLGPIGRALA LPWEGEQRAS FEIAKGRMQP TPLISYDRVH KTFAGPAGAV AAVDDVSLDI
AEGEFLAIVG SSGSGKTTLL RLANRLIEPD GGSIRIAGED ISCLEPVALR RRIGTVFQNG
ALFPHMTVAA NIGITPRLLG TAPKAVAARV DELLDLVQLD RAAHRNRLPD ALSGGQRQRV
GVARALAAGP RIVLMDEPFG ALDPLTRDTL GSDYRALHAQ LGLTTVMITH DITEALLLAD
RIAVMRSGHL VEAGTPAALA ASREPYVAEL MTTPRRQAAR LAALLPESGA A
|
|---|
| |