Gene BBta_6049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6049 
Symbol 
ID5155145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6269262 
End bp6270836 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content66% 
IMG OID640560762 
Productputative Beta-lactamase 
Protein accessionYP_001241883 
Protein GI148257298 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGTG TCAGGACCAG CGTCCGGGTC GCGGCTCTGC TGCTCGCCGG CTTGTTCACC 
CTCCACTTGT TCGCCCTCCG CCAGGCGGCC GCCGATGACG CGAGCCGAAC CGGCTTTCCG
CAAGCCGACT GGCCGGTCGC CACGCCCGAG GACGAAGGCA TGGATTCGGC GGCGCTGGCC
AAGCTCGTCG ACGCCGGCAA GGCGTTGAGG TTCGACAGCC TGCTGATCAC GCGCCACGGC
CGCATCGTGC TCGATGCCTC CTACGCGCCC TACAAATCGG ACGAATTGCA CATCATCAAT
TCCGCGACCA AGGCGGTGGT CGCCACCTTG ATCGCGATGC TGCAGAAGGA CGGCGTGCTC
GACAGCCTCG ATCATCCGGT GCTCGACTTG TTCAAGGACC GCCAGATCGA CAACGTCGAT
GCGCGCAAGC AGGCGCTCAC CGTGCAGCAT CTGCTCAACA TGACCTCCGG CCTGGACTGG
GACGAAGGCT ACAATGGCGG CACCGAGCGA TCACTGTTCG AGATGGGTCG GAGCCCCGAT
TGGGTGCAGT ACATTCTCGA CCGGCCGATG GCGCATGCGC CGGGCGAGAC CTTCTACTAC
AACAGCGGCA ACTCGCATCT GCTCTCCGCC ATCGTCACCA AGCTGACCGG CCGCAGCGCG
GAGGACTTCG CCAGAGAGCG ACTGTTCGCC CCGCTCGGCA TCACCGAGCA CGCCTGGTTC
AAGGATTCCA AGGGAATTTC CAGCGGCGGC TTCGGGCTGG CGCTGAGGCC GCGCGACATG
GCGCGGATCG GCTATCTGTA TCTACGCGGC GGCCGCTGGG GCGGGCAGCA ATTGCTGCCG
CCCGGCTGGA TCGAGGCCGT CAATCACGCC ACGACCAGCA TGAACGCGAC GTTCGACCCG
GGCCTGCACT ATGCCAATCA GTTCTGGGCC CTGCCGGACC GCAATGTCGT GATGGCGGTG
GGCTATCATT GCCAGCTCAT CATGGTGCTG CCCGATGCCG ACATCGTGGC GGTGATGACC
GCCCGCAATT TCTGTCCCTT CCGCAAGCTC GCGAACGATA TCCTGGCGAC GGTGAAATCG
AGCGAGGCCC TGCCCGCCGC GCCCGAAGCG ACGACGGCCC TGGCCGCGGC CGTCAGCGAT
GCCGCGACGG AGACACGGAG CACGGTCGGA GCTGCGCCGG ACATCGCGGC GGCCGTTTCG
GGCAAGACCT TCAGCTTCCC GCCGGGCCCG CTCGGCATCA ATGCGATCAC GCTCGACCTC
ACAGGACCCG ACCCGCATGT CGCGTGGGAC ATTCCACGGC AAGGCGGCGG TAGCGGCACA
CTACACCTGC AGAGCCCGAT CGGCCTCGAC GGCTCCTATC GCAAGACGGC GCAACCCCAT
CCGTGGCAGC CCTACACCTA TCGGGCGATG AAGGGCAGCT GGATCGACGC GACGACGTTT
GCGATCGACG TGCAGTTCAT CGGCCAGGGC GAAGAGCGCA ACTGGCGGCT CAGCTTCGAT
GGCGACAAGG TGACCTTCAA GACGAAGGGG CGATACGGCA AGGAACTTGC CGTCGAGGGG
CAAGCGCTGC CATGA
 
Protein sequence
MLRVRTSVRV AALLLAGLFT LHLFALRQAA ADDASRTGFP QADWPVATPE DEGMDSAALA 
KLVDAGKALR FDSLLITRHG RIVLDASYAP YKSDELHIIN SATKAVVATL IAMLQKDGVL
DSLDHPVLDL FKDRQIDNVD ARKQALTVQH LLNMTSGLDW DEGYNGGTER SLFEMGRSPD
WVQYILDRPM AHAPGETFYY NSGNSHLLSA IVTKLTGRSA EDFARERLFA PLGITEHAWF
KDSKGISSGG FGLALRPRDM ARIGYLYLRG GRWGGQQLLP PGWIEAVNHA TTSMNATFDP
GLHYANQFWA LPDRNVVMAV GYHCQLIMVL PDADIVAVMT ARNFCPFRKL ANDILATVKS
SEALPAAPEA TTALAAAVSD AATETRSTVG AAPDIAAAVS GKTFSFPPGP LGINAITLDL
TGPDPHVAWD IPRQGGGSGT LHLQSPIGLD GSYRKTAQPH PWQPYTYRAM KGSWIDATTF
AIDVQFIGQG EERNWRLSFD GDKVTFKTKG RYGKELAVEG QALP