| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6041 |
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| Symbol | dctM |
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| ID | 5155475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6261723 |
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| End bp | 6263048 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640560755 |
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| Product | TRAP-type C4-dicarboxylate transport system, large permease component (dctM subunit) |
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| Protein accession | YP_001241876 |
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| Protein GI | 148257291 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.145661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCC TCCTGATCTT CAGCCTGCTC ATCTTCCTGA TGCTGACGGG CATGCCGATC
TCGATCGCGC TCGGCCTCAC CGTGCTGTCC TTCGTCTTCT TCATGACGAA CGTGCCGACC
GAGTCGGTCG CGTTGAAGCT GTTCACGGGC ATCGACAATT TCGAGATCAT GGCGATCCCG
TTCTTCATTC TCGCCGGCAA TTTCCTGACC CATGGCGGCG TCGCCCGGCG CATGATCAAT
TTCGCGACCT CGATGGTCGG GCATTGGTAT GGCGGCCTGG GGCTGGCCGG CGTCATGGCC
TGCGCGTTGT TCGCCGCCGT GTCGGGCTCG TCGCCCGCGA CCGTGATCGC GATCGGCTCG
ATCATGCTGC CGGCGATGGT CAAGCAGGGC TTCCCGAAGC GCTTCGGCGC CGGCGTGATC
ACCACCTCCG GCGCGCTCGG TATTCTGATC CCGCCTTCGA TCGTGATGGT CGTCTATGCG
GTCGCGACCG GCGGCAGCAT CGCGCTCGAT CCGGCCGGCC ATCGCGTGTC CTCGGCCTCG
GTCGGCCAGC TGTTCATCGC CGGCGTCATT CCCGGAATCA TGCTGGCGAC CCTGCTCGGC
TTCACCACCT TCTATCGCGC CTGGAAGAAC GACTACCCGC GGCTGCCGCG CGCCAGCTGG
GCGGAGCGCT TCATTGCGTT CCGAAAGTGC ATCTGGGGTC TTTTGCTGAT CGTCATCGTG
CTCGGCGGCA TCTACACCGG CAAGTTCACG CCGACCGAGG CGGCTGCCGT CAGCGCCGTC
TACGCCTTCA TCATCGCCGT GTTCGTCTAT CGCGACATGT CGCTGAAGGA CGTGCCGAAG
GTGCTGCTCG GCTCGGCCAA TATGAGTGCG ATGATCCTCT ACATCATCAC CAATGCGGTG
CTGTTCTCGT TCCTGATGGC CAATGAGAAC ATCCCGCAGC AGATCGCCAA TTGGATGGCG
GCGGCCGGCG TCAACTGGGC GGTGTTCCTG CTGGTCGTCA ACATCCTGCT GCTGCTCGCC
GGCAATGTGA TGGAGGCGAC CTCGATCGTG CTGATCATGG CGCCGATCCT GTTTCCGGTG
GCGGTCAAGC TCGGCATCCA TCCGGTGCAT CTCGGCATCC TGATGGTGGT CAACATGGAG
GTCGGCATGT GCCATCCGCC GGTCGGCCTC AACCTCTATG TCGCCTCCGG CATCGCCAAG
ATGGGCATCA CCGAACTGAC CATCGCCGTG ATGCCGTGGC TGCTGACCAT GCTCGGCTTC
CTGGCCCTCG TGACCTACGT GCCGGAAATC TCGCTCTGGT TGCCGCGCAT GCTCGGGATG
CTTTGA
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| Protein sequence | MSSLLIFSLL IFLMLTGMPI SIALGLTVLS FVFFMTNVPT ESVALKLFTG IDNFEIMAIP
FFILAGNFLT HGGVARRMIN FATSMVGHWY GGLGLAGVMA CALFAAVSGS SPATVIAIGS
IMLPAMVKQG FPKRFGAGVI TTSGALGILI PPSIVMVVYA VATGGSIALD PAGHRVSSAS
VGQLFIAGVI PGIMLATLLG FTTFYRAWKN DYPRLPRASW AERFIAFRKC IWGLLLIVIV
LGGIYTGKFT PTEAAAVSAV YAFIIAVFVY RDMSLKDVPK VLLGSANMSA MILYIITNAV
LFSFLMANEN IPQQIANWMA AAGVNWAVFL LVVNILLLLA GNVMEATSIV LIMAPILFPV
AVKLGIHPVH LGILMVVNME VGMCHPPVGL NLYVASGIAK MGITELTIAV MPWLLTMLGF
LALVTYVPEI SLWLPRMLGM L
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