| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6033 |
|---|
| Symbol | |
|---|
| ID | 5154777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6254156 |
|---|
| End bp | 6254941 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640560748 |
|---|
| Product | putative ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_001241870 |
|---|
| Protein GI | 148257285 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGGCGC CGACGGCCAT CGACATTCGC AATCTGTCGC TGACGTTCCA GACCGGCGAC
GGTCCGGTCT ACGCGCTCGC CGATGCCAAT CTGACCATCG CCAAAGGCGA GTTCGTGTCC
TTCATCGGCC CGTCGGGGTG CGGCAAGACC ACGCTCTTGC GCGTGATCGC CGATCTCGAG
CAGCCGACAT CCGGCAGCAT CACCGTCAAT GGCCTCGCGC CTCGCGACGC GCGTCTGAAG
CGCCAATATG GCTACGTGTT CCAGGCGCCG GCGCTGTATC CGTGGCGTAC GGTGGAAGCC
AATGTGATGC TGCCGCTCGA AGTGTTCGGC CTGCCGAAAG CCGAGCGCCG CGAGAGGGCG
CGCAAGCATC TCGACTTGGT CAGGCTGTCG GGTTTTGCCA ACAAATATCC GTGGCAGCTG
TCCGGCGGCA TGCAGCAGCG CGTCTCGATC GCGCGTGCGC TGTCGTTCGA GCCTGAGCTG
TTGCTGATGG ACGAGCCGTT CGGCGCGCTG GACGAGATCG TGCGCGACCA GCTTAACGAG
CAGCTTGTGA AGCTCTGGAG CCAGACGCGC AAGACGATCG TGTTCGTCAC GCATTCGATT
CCCGAAGCCG TGTTCCTGTC GTCGCGCATT GTGGTGATGT CGCCGCGGCC GGGGCGCATC
ATCGACGTGA TCGACTGCGA CTTCGGAGCC GAACGCACGC TCGACATCCG CGAGAGCCCG
GAGTTTCTGA AAGTCGCCCA CCGCGTCAGG GAGGGGCTGC GCGCCGGCCA TAGCTACGAT
GAGTAG
|
|---|
| Protein sequence | MRAPTAIDIR NLSLTFQTGD GPVYALADAN LTIAKGEFVS FIGPSGCGKT TLLRVIADLE
QPTSGSITVN GLAPRDARLK RQYGYVFQAP ALYPWRTVEA NVMLPLEVFG LPKAERRERA
RKHLDLVRLS GFANKYPWQL SGGMQQRVSI ARALSFEPEL LLMDEPFGAL DEIVRDQLNE
QLVKLWSQTR KTIVFVTHSI PEAVFLSSRI VVMSPRPGRI IDVIDCDFGA ERTLDIRESP
EFLKVAHRVR EGLRAGHSYD E
|
|---|
| |