Gene BBta_6030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6030 
Symbol 
ID5154774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6251212 
End bp6252201 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content64% 
IMG OID640560745 
Productputative ABC transporter, substrate binding protein 
Protein accessionYP_001241867 
Protein GI148257282 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA GATTGATGCT CGGCGCGGCG CTGCTGGTGG GAATCGCGAC TCCTGGCTCG 
GCCGATGACA AGGTGACCTT GCAGCTGAAA TGGGTGACGC AGGCCCAGTT CGCCGGCTAC
TACGTCGCCA AGGACAAGGG CTTCTACAAG GCGGAAGGCC TCGACGTCAC CATCAAGCCG
GGCGGCCCGG ACATCGCTCC GCCGCAGGTG ATCGCAGGCG GCGGTGCCGA CGTGATCATC
GACTGGATGC CGGCTGCGCT CGCCGCGCGC GAGAAAGGCG TGCCGCTGGT CAACATCGCC
CAGCCTTTCA AGCGCTCCGG CATGATGCTG ACCTGCCGCA AGGATTCCGG CGTCGCGACC
CCGGCAGACT TCAAGGACAA GACGCTCGGC GTTTGGTTCT TCGGCAACGA ATATCCGTTC
ATGGCCTGGA TGGCCAAGCT CGGCTACAAG ACCGACGGCT CGGCCGGCGG CGTCAAGGTC
ATCAAGCAGG GCTTCAACGT CGATCCGCTG ATCCAGAAGC AGGCCGCCTG CGTCTCGACC
ATGACCTACA ACGAATATTG GCAGGTCATC GACGCCGGGC TGAAGCCCGA CGAGCTCGTG
GTGTTCAACT ACACCGACCA GGGCGTCTCC ACCATGGAGG ACGGGCTCTA CGTGCTCGAG
AGCAAGCTGT CGGACGCCGC CTTCACCGCG AAGATGGCGA AGTTCGTCAA GGCCACGATG
AAAGGCTGGG AGTTCGCGCG CAGCAATCCG GACGAGGCGG TCAAGATCGT GCTCGACAAC
GACGCGACCG GCGCTCAGAA GGAGGCGCAC CAGAAGCGCA TGATGGGCGA GATCAACAAG
CTCACCGCGG GCTCCACCGG CAAGCTCGAT CCGGCCGATT TCGACCGTAC CGTGACCACG
CTGCTCGGTG CCGGCGGCGA CCAGCCGGTC ATCACCAAGA AGCCCGAGGG CGCCTGGACT
CACGCGGTGA TCGATGCGGC CCTGAAGTAG
 
Protein sequence
MLKRLMLGAA LLVGIATPGS ADDKVTLQLK WVTQAQFAGY YVAKDKGFYK AEGLDVTIKP 
GGPDIAPPQV IAGGGADVII DWMPAALAAR EKGVPLVNIA QPFKRSGMML TCRKDSGVAT
PADFKDKTLG VWFFGNEYPF MAWMAKLGYK TDGSAGGVKV IKQGFNVDPL IQKQAACVST
MTYNEYWQVI DAGLKPDELV VFNYTDQGVS TMEDGLYVLE SKLSDAAFTA KMAKFVKATM
KGWEFARSNP DEAVKIVLDN DATGAQKEAH QKRMMGEINK LTAGSTGKLD PADFDRTVTT
LLGAGGDQPV ITKKPEGAWT HAVIDAALK