Gene BBta_6013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6013 
SymbolnosX 
ID5153690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6233547 
End bp6234545 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content67% 
IMG OID640560734 
Productnitrous oxide reductase accessory protein NosX (required for nitrous oxide reduction), ApbE-like lipoprotein 
Protein accessionYP_001241856 
Protein GI148257271 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.279768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.154991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC ACCTCTCGCG ACGACGCTTC ATCCGTATCA GTGCCGCGAT GGCCGGACTT 
GCACTGGCTC CGCGCGCCAC CGATGCCGCC CAGGACATGA GCGGTCTGGT CGAATGGCGT
GGCACCCTCC TCGGCGCCGT CGCCACCATG AAGCTGCACC ACCCGGATCG CGCGGAAGCC
GAACGGCTGA TCGCGCGATC GGTCGCCGAA GCACGCCGGC TGGAACGGCT GTTCAGCCTC
TATCTCCCGG ACTCCGCGCT GGTCACGCTG AACCGCACCG GCGTGCTCGT CGAGCCGGCG
CCCGAGCTCG TCGACATTCT CACGCTGTCG CAGCGCTATG CTGTCCTAAC CGAGGGCCGC
TTCGATCCCA CGGTTCAGCC GTTGTGGACG CTCTATGCCG ATCACTTCGC GCGCCCCGAT
GCGGATCCCG ACGGCCCCAA GCGGGCGGCG ATCCGCGAGG CGCTGGCACG GGTCGGCTAT
CACAGGCTCA CCGTGAGCCG GGATCGGATC GTCATGCCGC AAGGCACTGC GATTACCCTG
AACGGCGTCG CACAAGGCTA TGTCACCGAC AGGATCGTTG ATCTCCTGCG CAGCCAGGGG
GTGCGGCAGA GCCTCGTCGA CATGGGCGAG GCGCGGGCCA TCGGGACACG GCCGGACGGA
CACCCCTGGG ACGTCGCGAT CGAGGATCCG GACGTCGCCG GTCGCACGGC CGAGATGCTG
GCCGTCATCG ACCGGGCCGT ATCGACATCC GGCGCCTATG GCTTCCGTTT CGATCCTCAG
GGCCGCTTCA ACCATCTGTT CGATCCGCAG AGCGGCGGCT GCGCACATTC CTATCGCAGC
GTGGCAACCG TGGCCGCCGA TGCCACCGCC GCAGATGCGC TATCCACCGC ATTCAGCATC
ATGCCGGAAA CCGACATCCG CGCGGTCATG CCGCGCGCCG GGATCGATCG CGTTCATCTG
ATCGACGCGA ACGGTGTGGC CGTCGATCTC ATCGCCTGA
 
Protein sequence
MTHHLSRRRF IRISAAMAGL ALAPRATDAA QDMSGLVEWR GTLLGAVATM KLHHPDRAEA 
ERLIARSVAE ARRLERLFSL YLPDSALVTL NRTGVLVEPA PELVDILTLS QRYAVLTEGR
FDPTVQPLWT LYADHFARPD ADPDGPKRAA IREALARVGY HRLTVSRDRI VMPQGTAITL
NGVAQGYVTD RIVDLLRSQG VRQSLVDMGE ARAIGTRPDG HPWDVAIEDP DVAGRTAEML
AVIDRAVSTS GAYGFRFDPQ GRFNHLFDPQ SGGCAHSYRS VATVAADATA ADALSTAFSI
MPETDIRAVM PRAGIDRVHL IDANGVAVDL IA