Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5999 |
Symbol | leuD |
ID | 5154238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6214091 |
End bp | 6214711 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640560722 |
Product | 3-isopropylmalate dehydratase small subunit |
Protein accession | YP_001241844 |
Protein GI | 148257259 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00648667 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGACCGT TCGACATCAT CACGACGACC GCCTGCGCGC TGCCGCTTGC CAGCATCGAC ACCGATCAGT TGATCCCGGC GCGTTTCATG AAACGCTCGC GCGCCGACGG TTACGGTCAA TACTTGCTGC ACGACATGCG CTTCGACGAG ACGGGTCAGG CCAGGCCCGA TTTCCCGCTC AACGCCGCCA GCGCTGCCGG GGCCGAGGTG CTGGTGACAC GGCGCAATTT CGGCGCCGGC TCGTCGCGCG AAGCGGCGGT CTATGCGCTG GTCGATTTCG GCTTCCGCTG CGTGATCGCG CCGAGCTTCG GCGACATCTT CGCGTCGAAC GCGGTCAACA ACGGCCTGTT GCCGGCGACG GTCAGCGAGG CCGACGCGGA AGAGATCCTG TCCCTGCTGC CATCGACGGG AGCGGCGATC ACGATCGATC TGAGAGATGG TCTCATCCGA CTGGGCAATC GCACGTTCTC ATTCAGCGTC GATCCGATCT GGCGTACCAA GCTGCTGAAC GGCTGGGACG ACCTTGATCT CACGGTCTCC CTGGCTGACG GTATCACCGG CTTCGAAGCG CGCGACGCCC ATCAACGGCC CTGGGCCGCT CTCGGAACCC GGCGCGCCTG A
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Protein sequence | MRPFDIITTT ACALPLASID TDQLIPARFM KRSRADGYGQ YLLHDMRFDE TGQARPDFPL NAASAAGAEV LVTRRNFGAG SSREAAVYAL VDFGFRCVIA PSFGDIFASN AVNNGLLPAT VSEADAEEIL SLLPSTGAAI TIDLRDGLIR LGNRTFSFSV DPIWRTKLLN GWDDLDLTVS LADGITGFEA RDAHQRPWAA LGTRRA
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