Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5997 |
Symbol | |
ID | 5154189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6210633 |
End bp | 6212636 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640560720 |
Product | putative NADH-dependent flavin oxidoreductase |
Protein accession | YP_001241842 |
Protein GI | 148257257 |
COG category | [C] Energy production and conversion |
COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00579337 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGTCGCAGC ATCAGCCATT TGCACAGGCG CTAAGCCCGC TCGACGTCGG CCCCCTGCGC TTCCGCAACC GCATCTTCGT TCCCGCACAC ACGACGAATT TCGGTGAGCA CCATCTGCCG AGCGCGCAGC ATCTCGCCTA TCACCGCGCC CGCGCGCGCG GCGGCGTCGG CGCCATCATC TTCGAATCCA TCCGCGTGCA CGCCAATTCG CTCGGCCGGC CGCAGGCGGT GTGCGGCTTC GACCCGGCCT GCATCGATCC GTTCCGCCGC ATCACCGATG CGGTGAAGGC GGAGGGCGCG GTGATGCTCG GCCAGATCAT CCATCTCGGA CGGCAGGTCG AAGGCGATTT CGAGCGCACG GTGGCATGGG GCGCCTCAGC CGTGCCGTGG TCGATCTCGG CGCTGCCGCC GCGACCGATG GACGAATTCG ACATGGAAGA GGTGATCGAG GGACACCTCG TCACGGCGCG CAATCTGGTC GCCGCCGGCT TCGACGGCAT CGAACTGCAG ATGGCGCATG GCCATCTGCT GCAGCAGTTC ATGTCGCCGC TCTCCAACAA GCGAAATGAT GAGTATGGCG GCGCGCTGGA GAACCGGCTG CGTTTTCCCG CCCGCGTGCT GGCGGCGCTG CGCGCCGAGC TCGGAGCCGG CTTCTGCCTC GGCATCCGCA TCAGCGGCGA GGAATATGCC GAGGGCGGGC TCGGCATTGA CGAGGCCGAG CGGATCGTGC CGATGCTGGC GCGGCAGACG CGGATCGACT TCATCAACGT CTCACACTCG GCCTATGTCG CGAGCTATTC GCTGGCGACG CAGATGGCCG ACATGGCGTT CGATCCGGCG CCGTTCCGCA GCCTGCCCGC GCGCATCCGC GCCGAGCTGC GGACGGAGGG GTTTGACACG CCAGTCTTTG CCGTGTGCCG ATTTACGGGA CTCGACGAGG CCGATGCCAT GATCGCGGCC GGCCACGCGG ACGCGGTCGG CATGGCGCGC GCGCATCTCG CCGAACCGGC GATCGTGCGG AAGTCCGTCG AGGGCCGCCT CGACGAGATC CGCCGCTGCA TCGGCTGTAA CCAGGGCTGC GCCGGCATGC TGGAGCGGAA CCTGCCGATC CGCTGCCTGA TCAATCCGAT CGCCGGGCTC GAGGCGCAAT TTGACGAGCC CGAAGCACTG CCGCGCGGCG CGCGCAAGAA GGTCCTGGTC GTCGGCGGCG GCCCGGCGGG CCTCGAAGCC GCGCGCGTCG CGGCGGCGCT CGGGCATGAT GTCACGCTGT GGGAGCGCAG CGATCAGCTC GGCGGCCAGT TGCGCACGGC TTGGCTGATG CCGAAGCGCG CCAATTTCGA GACGTTCGTC GCGTTCCAGA TCGCGGCACT CGCCCGGCTC GGCGTCACCA CGATCTTCAA CAAGGAGGCC AGCGCAGCCG AGATCGCGGC GTTTGGCGCC GATCGCATCA TCCTGGCGAC GGGCTCGACA ACGACGCCGA TGCCGGTCCC CGGCAGCGGG CCGGTCTTCA CCCTGCCCGA CGCGCTGCGT GCGCCGGACA GGCTCGGCGC AGCGGTGGCC GTGTTCGACC GCACCGGCGA ATGGGGCACG CTGGCGGCGC TGGAGCATTT CGCCGACCTC GGCAAAGCCG TGACCTTGTT CGTTCCGGCC GCGAGCTACG CCTGGCGCAC CACGATCTAT TCGACGCTCG CCAACAGCCG CCGCCTGCGC GAGCGCAAGG TGAGGATCGC GACCCTGCGC GCGGTCCGCG CGTTCGACGG CGGCACGCTG GAGGTCGAGG ATCTCTCGAC CGGCGAGGTC GCGCGACTGT CCGGCTTCTC TGCGCTGGTG GCGGTCGATC ACAACAGCGC CGACCAGACG CTCTATCTCG CGCTGCGCCG GGCCGGGCTT CCGGTGATGC AGGCCGGCGA CAACAATGCG CCGCGCACGG CGCTGGAGGC GACGTATCAG GGCCACATGG CGGCGCGGGC CCCCTTCCCT GCAGCCTCGG GACTCACGAC ATGA
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Protein sequence | MSQHQPFAQA LSPLDVGPLR FRNRIFVPAH TTNFGEHHLP SAQHLAYHRA RARGGVGAII FESIRVHANS LGRPQAVCGF DPACIDPFRR ITDAVKAEGA VMLGQIIHLG RQVEGDFERT VAWGASAVPW SISALPPRPM DEFDMEEVIE GHLVTARNLV AAGFDGIELQ MAHGHLLQQF MSPLSNKRND EYGGALENRL RFPARVLAAL RAELGAGFCL GIRISGEEYA EGGLGIDEAE RIVPMLARQT RIDFINVSHS AYVASYSLAT QMADMAFDPA PFRSLPARIR AELRTEGFDT PVFAVCRFTG LDEADAMIAA GHADAVGMAR AHLAEPAIVR KSVEGRLDEI RRCIGCNQGC AGMLERNLPI RCLINPIAGL EAQFDEPEAL PRGARKKVLV VGGGPAGLEA ARVAAALGHD VTLWERSDQL GGQLRTAWLM PKRANFETFV AFQIAALARL GVTTIFNKEA SAAEIAAFGA DRIILATGST TTPMPVPGSG PVFTLPDALR APDRLGAAVA VFDRTGEWGT LAALEHFADL GKAVTLFVPA ASYAWRTTIY STLANSRRLR ERKVRIATLR AVRAFDGGTL EVEDLSTGEV ARLSGFSALV AVDHNSADQT LYLALRRAGL PVMQAGDNNA PRTALEATYQ GHMAARAPFP AASGLTT
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