| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5976 |
|---|
| Symbol | |
|---|
| ID | 5154005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6187062 |
|---|
| End bp | 6188549 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640560699 |
|---|
| Product | putative 4Fe-4S ferredoxin, fixG-like protein |
|---|
| Protein accession | YP_001241821 |
|---|
| Protein GI | 148257236 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | [TIGR02745] cytochrome c oxidase accessory protein FixG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.396746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCATCA CCATCGAGAT CGATCACGCC AGGACGCGCC GCGCGGCGCA GGGCCAGAGC
CAGTCCCCGG CTCGCGGCCA AGCGCCTGTC CGCAAGCCGG CACGATCCCC ATGCCAGCTC
GGCGGTCCCG TGGTTCCGCA AGGCGTCAAG GGGCCGATCC GCCGGCTCAA ATGGCTGATC
CTGATGCTCA CCCTCTCGGT CTACTACGTC ACGCCCTTCA TCCGCTGGAA CCGCGGCTCG
AATGCGCCTG GGCAGGCCGT GCTGCTCGAT TTCGCCCATG GAAAACTCTA TCTCGGCCCG
GCCGAGATCT GGCCGCAGGA CCTCTATCTC ATCACCGCGG CGATGCTGCT GGCGACACTG
ATACTCGTCC TGGTGAATGC ACTGGCCGGG CGCTTGTGGT GCGGCTTCGC CTGCCCGCAG
ACGGTGTGGA CCGATCTGTT CCTGCTGGTC GAGCGGCTGG TCGAAGGCGA TCGCCGGCAG
CGGCTGAAGA ATATCGGTGC GCCGCTGACG ACGAAGCGGG TGGCGCAGAT CGCGACCAAG
CACGCGCTGT GGATGATGAT CGCGCTTCTC ACCGGCGGCA CCTTGATCTT CTACTTCACC
GACGCGCCGG AACTGGTGCG CGACGTCATT CATGGCGAGA TGTCGCCGAC CGCGCTGACC
TGGACGCTGG TGTTCGCCGG CACGACCTAT GGCCTGGCCG GCTTCGCGCG CGAGCAGGTC
TGCACCTTCA TGTGCCCGTG GCCGCGGCTG CAGGGCGCGA TCTGGGACGC CGAAGCCTTC
ACCGTGAATT ACCGCGACTA TCGCGGCGAG GTCAGGATGT CGGCGAAGAA GGCCGCCGAG
GCCCGCTCGC AGGGGCTGCC GGCCGGCGAT TGCGTCGATT GCGGCGCCTG CGTCGCGGTC
TGCCCGATCG GCATCGACAT CCGCCAGGGG CCGAATTTTG CCTGCATCAA TTGCGGCCTC
TGCGTCGACG CCTGCGATGG TGTGATGGCC AGGCTCGACC GTCCGCGCGG CCTGATCGAC
TACGAAAGCT GGGACAATAT CGAGCGCGGC CGCGCGGGCC AGCCGCGTGT GTCGCGGCTG
CTGCGGCCGA AGACGGTCGG GCTCGCGCTC GCCTGTGTCG CGCTGGCCGG CATCATCGCG
GTGTCGTTTG TGACCAAGAC CACCGCCGTA CTCTCGGTGC AGCACGATCG CGATCCGATG
TCGGTGCGGC TGTCGGATGG TTCGGTCCGC AACGCCTATA CGGTCAAGCT GCTCAACAAG
TCGGCGGCCG TGCAGAGCTT CACGCTCGGC ATCAGCGGCG TCGACGCGGC GCTCGCGATT
GTCGGTCACG CGACGGCGGA TGCGATCACG GTCGAGCCGG ACGGCTCCGA GACCCTGCGC
GTGACGCTGA CCATGCCCGA GCCGCGCGAC GCCGATGTCA CCTTCCAGGC CATCGGGGCC
GGCGGTCAGG TCGTTTTGAC CGCGCACGAT CGCTTCATCG ACCGGTAG
|
|---|
| Protein sequence | MAITIEIDHA RTRRAAQGQS QSPARGQAPV RKPARSPCQL GGPVVPQGVK GPIRRLKWLI
LMLTLSVYYV TPFIRWNRGS NAPGQAVLLD FAHGKLYLGP AEIWPQDLYL ITAAMLLATL
ILVLVNALAG RLWCGFACPQ TVWTDLFLLV ERLVEGDRRQ RLKNIGAPLT TKRVAQIATK
HALWMMIALL TGGTLIFYFT DAPELVRDVI HGEMSPTALT WTLVFAGTTY GLAGFAREQV
CTFMCPWPRL QGAIWDAEAF TVNYRDYRGE VRMSAKKAAE ARSQGLPAGD CVDCGACVAV
CPIGIDIRQG PNFACINCGL CVDACDGVMA RLDRPRGLID YESWDNIERG RAGQPRVSRL
LRPKTVGLAL ACVALAGIIA VSFVTKTTAV LSVQHDRDPM SVRLSDGSVR NAYTVKLLNK
SAAVQSFTLG ISGVDAALAI VGHATADAIT VEPDGSETLR VTLTMPEPRD ADVTFQAIGA
GGQVVLTAHD RFIDR
|
|---|
| |