Gene BBta_5970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5970 
SymboladhC 
ID5153783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6180517 
End bp6181626 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content63% 
IMG OID640560693 
Productalcohol dehydrogenase class III 
Protein accessionYP_001241815 
Protein GI148257230 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.66491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC GCGCCGCGGT CGCTTTCGAA GCCAAGAAGC CGCTGGAGAT CGTCGAGGTT 
GACCTCGAAG GACCGAAGGC CGGTGAAGTG CTGGTCGAGA TCAAGGCGAC CGGCATCTGC
CACACGGATG CCTATACGCT GGATGGTTTC GACAGCGAAG GCATCTTCCC GTCGATCCTC
GGCCATGAGG GCGCCGGCAT CGTGCGCGAG GTCGGTCCCG GCGTGACCTC GGTCAAGCCC
GGCGATCATG TCATTCCGCT GTACACACCG GAGTGCCGCC AGTGCAAGAG CTGCCTCAGC
CGCAAGACCA ATCTCTGCAC CGCAATCCGC GCGACGCAGG GCAAGGGCTT GATGCCGGAC
GGCACCTCGC GCTTCAGCTA TAAGGGTCAG ACCATCTACC ATTACATGGG CTGCTCGACC
TTCTCCAACT TCACCGTGCT GCCGGAGATC GCGGTGGCGA AGATCCGAGA GGACGCGCCG
TTCGACAAGA GCTGCTACAT CGGCTGCGGC GTCACCACCG GCGTCGGTGC GGTCGTCAAC
ACGGCGAAGG TGGAGCCGGG CTCGAACGTG ATCGTGTTCG GTCTCGGCGG CATCGGCCTC
AACGTCATCC AGGGCGCCAA GATGGCGGGG GCCGACAAGA TCATCGGCGT CGACCTCAAT
GACGGCAAGG AGGAATGGGG CCGTCGCTTC GGCATGACCC ACTTCGTCAA CCCGAAGAAG
GTCACCGGCG ACATTGTTCA GCATCTGGTC GCGCTCACCG ATGGCGGCGC CGACTACACC
TTCGACTGTA CCGGCAACAC CACCGTGATG CGCCAAGCGC TCGAAGCCTG CCACCGCGGC
TGGGGCGAAT CGATCATCAT CGGCGTCGCC GAGGCAGGCA AGGAGATCTC CACCCGCCCA
TTCCAGCTCG TCACCGGGCG CGTCTGGAAG GGCACTGCGT TCGGCGGCGC GCGTGGGCGC
ACCGACGTCC CCAAGATCGT CGACTGGTAC ATGAACGGGA AGATCGAAAT CGACCCGATG
ATCACCCACA CGCTCAAGCT CGAAGAGATC AACAAAGGCT TCGACCTGAT GCATGAGGGC
AAATCGATCC GTTCCGTCGT CGTGTTCTGA
 
Protein sequence
MKTRAAVAFE AKKPLEIVEV DLEGPKAGEV LVEIKATGIC HTDAYTLDGF DSEGIFPSIL 
GHEGAGIVRE VGPGVTSVKP GDHVIPLYTP ECRQCKSCLS RKTNLCTAIR ATQGKGLMPD
GTSRFSYKGQ TIYHYMGCST FSNFTVLPEI AVAKIREDAP FDKSCYIGCG VTTGVGAVVN
TAKVEPGSNV IVFGLGGIGL NVIQGAKMAG ADKIIGVDLN DGKEEWGRRF GMTHFVNPKK
VTGDIVQHLV ALTDGGADYT FDCTGNTTVM RQALEACHRG WGESIIIGVA EAGKEISTRP
FQLVTGRVWK GTAFGGARGR TDVPKIVDWY MNGKIEIDPM ITHTLKLEEI NKGFDLMHEG
KSIRSVVVF