Gene BBta_5957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5957 
Symbol 
ID5152441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6170466 
End bp6171176 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID640560680 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001241802 
Protein GI148257217 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.844305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.429944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCTTG ATGTCGATAT CAGCTCGAAG AGCTACACCA GCGCCAATGG CAAGCGGCAG 
CAGGTGATCG CCGGGATGAC GTTCACGCTC CGACGCGGCG AGGTCGGGGT CGTGGTCGGC
CCATCCGGCT GCGGCAAGAG CACGATGCTG CGGATCCTCG CGGGCCTCGA TTCCGATTAT
CAAGGCAAGG TGTCGCAACC CGCCGGTGCG CGGCTCGCGA TGGTGTTCCA GGAGCCCCGG
CTGCTGCCGT GGCGATCGGT GGAGGACAAT GTCCGGCTGG CGGCGCCTGA CGTTGCGGAG
GACAGGCTGT CTGCCATCTT CGCCGTGCTC GAGCTCGAGG GGCATCGCAG CCATTTTCCG
GGCGAGCTGT CCCTCGGCCT CGCACGTCGG GCAGCGCTGG CACGGGCATT CGCGGTCGAA
CCGGACTTCC TGATTCTCGA TGAGCCGCTG GCCTCGCTTG ACGATGCTCT CGCCGCGCGG
CTGCGCGAGG AAATTGCGAC ATTGGTGGCC TCGCGGCCGA TGATCACGCT GCTGGTCACG
CACAGTATGG ATGATGCGGT CCGGCTCGGG GATCGTATCT TCCTGCTGTC CTCACGACCG
GCCCGGCTGC TCCACACGGT CCCGATCGCC GTGCCACGTG CGCAGCGCAG CAACGAGCTC
ATTGCCGCGA TCAAGGCCGA TCTGGCGCGA TTGGATTTTT CCGTGTCATA G
 
Protein sequence
MQLDVDISSK SYTSANGKRQ QVIAGMTFTL RRGEVGVVVG PSGCGKSTML RILAGLDSDY 
QGKVSQPAGA RLAMVFQEPR LLPWRSVEDN VRLAAPDVAE DRLSAIFAVL ELEGHRSHFP
GELSLGLARR AALARAFAVE PDFLILDEPL ASLDDALAAR LREEIATLVA SRPMITLLVT
HSMDDAVRLG DRIFLLSSRP ARLLHTVPIA VPRAQRSNEL IAAIKADLAR LDFSVS