Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5957 |
Symbol | |
ID | 5152441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6170466 |
End bp | 6171176 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640560680 |
Product | putative ABC transporter ATP-binding protein |
Protein accession | YP_001241802 |
Protein GI | 148257217 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.844305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.429944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGCTTG ATGTCGATAT CAGCTCGAAG AGCTACACCA GCGCCAATGG CAAGCGGCAG CAGGTGATCG CCGGGATGAC GTTCACGCTC CGACGCGGCG AGGTCGGGGT CGTGGTCGGC CCATCCGGCT GCGGCAAGAG CACGATGCTG CGGATCCTCG CGGGCCTCGA TTCCGATTAT CAAGGCAAGG TGTCGCAACC CGCCGGTGCG CGGCTCGCGA TGGTGTTCCA GGAGCCCCGG CTGCTGCCGT GGCGATCGGT GGAGGACAAT GTCCGGCTGG CGGCGCCTGA CGTTGCGGAG GACAGGCTGT CTGCCATCTT CGCCGTGCTC GAGCTCGAGG GGCATCGCAG CCATTTTCCG GGCGAGCTGT CCCTCGGCCT CGCACGTCGG GCAGCGCTGG CACGGGCATT CGCGGTCGAA CCGGACTTCC TGATTCTCGA TGAGCCGCTG GCCTCGCTTG ACGATGCTCT CGCCGCGCGG CTGCGCGAGG AAATTGCGAC ATTGGTGGCC TCGCGGCCGA TGATCACGCT GCTGGTCACG CACAGTATGG ATGATGCGGT CCGGCTCGGG GATCGTATCT TCCTGCTGTC CTCACGACCG GCCCGGCTGC TCCACACGGT CCCGATCGCC GTGCCACGTG CGCAGCGCAG CAACGAGCTC ATTGCCGCGA TCAAGGCCGA TCTGGCGCGA TTGGATTTTT CCGTGTCATA G
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Protein sequence | MQLDVDISSK SYTSANGKRQ QVIAGMTFTL RRGEVGVVVG PSGCGKSTML RILAGLDSDY QGKVSQPAGA RLAMVFQEPR LLPWRSVEDN VRLAAPDVAE DRLSAIFAVL ELEGHRSHFP GELSLGLARR AALARAFAVE PDFLILDEPL ASLDDALAAR LREEIATLVA SRPMITLLVT HSMDDAVRLG DRIFLLSSRP ARLLHTVPIA VPRAQRSNEL IAAIKADLAR LDFSVS
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