Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5925 |
Symbol | nifH |
ID | 5153009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6141335 |
End bp | 6142222 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640560650 |
Product | nitrogenase reductase |
Protein accession | YP_001241772 |
Protein GI | 148257187 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.780912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCAC TTCGACAAAT CGCATTCTAC GGCAAAGGCG GCATCGGCAA GTCGACGACG TCGCAGAACA CGCTCGCGGC GCTGGCCGAG ATGGGTCACC GGATCCTGAT CGTCGGCTGC GACCCCAAGG CGGATTCGAC CCGCCTGATC CTGCACGCCA AGGCGCAGGA CACCATCCTC AGCCTGGCCG CTGCCGCGGG CAGCGTCGAG GACCTCGAGA TCGAAGAGGT CATGAAGGTC GGCTATCGCG ACATCCGTTG CGTGGAGTCC GGCGGTCCGG AGCCGGGCGT CGGATGTGCC GGCCGCGGCG TCATCACCTC GATCAACTTC CTGGAAGAGA ACGGCGCCTA TGAGGACATC GACTACGTGT CCTACGACGT GCTCGGCGAC GTGGTCTGCG GCGGCTTCGC GATGCCGATC CGCGAGAACA AGGCGCAGGA AATCTACATC GTGATGTCCG GCGAGATGAT GGCGATGTAT GCCGCCAACA ACATCTCCAA GGGCATTCTG AAATATGCCA ATTCCGGCGG CGTCCGCCTC GGCGGCCTGG TCTGCAACGA GCGCCAGACC GACAAGGAGC TGGAACTGGC CGAGGCTCTC GCCAAGAAGC TCGGCACCCA GCTGATCTAC TTCGTGCCGC GCGACAATAT CGTGCAGCAC GCCGAGCTGC GCCGCATGAC GGTGCTGGAA TATGCGCCGG AGTCGGTGCA GGCCAACCAC TACCGTAACC TGGCGACCAA GATCCACGGC AATGCCGGCA AGGGCATCAT CCCGACCCCG ATCACGATGG ACGAGCTCGA GGACATGCTG ATGGAGCACG GCATCATGAA GGCGGTGGAC GAGAGCCAGA TCGGCAAGAC CGCCGCCGAG CTCGCCGCCA CGGCCTAA
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Protein sequence | MSSLRQIAFY GKGGIGKSTT SQNTLAALAE MGHRILIVGC DPKADSTRLI LHAKAQDTIL SLAAAAGSVE DLEIEEVMKV GYRDIRCVES GGPEPGVGCA GRGVITSINF LEENGAYEDI DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMAMY AANNISKGIL KYANSGGVRL GGLVCNERQT DKELELAEAL AKKLGTQLIY FVPRDNIVQH AELRRMTVLE YAPESVQANH YRNLATKIHG NAGKGIIPTP ITMDELEDML MEHGIMKAVD ESQIGKTAAE LAATA
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