| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5924 |
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| Symbol | nifD |
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| ID | 5153008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6139757 |
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| End bp | 6141259 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640560649 |
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| Product | nitrogenase molybdenum-iron protein alpha chain, nifD |
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| Protein accession | YP_001241771 |
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| Protein GI | 148257186 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01282] nitrogenase molybdenum-iron protein alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.127906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTA TCGAGAAACA AAGCGTTGCC GAGATCAAGG CACGCAACAA GGAACTGATC
GCCGAGGTCC TGAAGGTCTA TCCCGAGAAG ACCGCCAAGC GTCGTGCCAA GCACCTCAAC
GTCCACGAGT CCGGCAAGTC GGACTGCGGC GTCAAGTCGA ACATCAAGTC GATCCCCGGC
GTCATGACCA TCCGCGGCTG CGCCTATGCC GGCTCGAAGG GCGTGGTGTG GGGCCCGATC
AAGGACATGA TCCATATCAG CCACGGCCCG GTCGGCTGCG GCCAGTATTC CTGGGCGGCG
CGCCGCAACT ATTACATCGG CACGACCGGC ATCGACACCT TCGTGACGAT GCAGTTCACC
TCCGACTTCC AGGAAAAGGA CATCGTCTTC GGCGGCGACA AGAAGCTCGC CAAGATCATG
GACGAGATCC AGGAGCTGTT CCCGCTGAAC AACGGCATCA CCGTGCAGTC CGAATGCCCG
ATCGGACTGA TCGGCGACGA CATCGAGGCG GTCTCCAAGA CCAAGTCGAA GGAATATGAC
GGCAAGACCA TCGTTCCGGT CCGCTGCGAA GGCTTCCGCG GTGTCTCCCA GTCCCTGGGG
CACCACATCG CCAACGACGC TATCCGGGAC TGGGTGTTCG ACAAGCTGCC GGCCGACGCC
GCGCCGCGGT TCGAGCCGTC CGATTACGAT GTCGCGATCA TCGGCGACTA CAATATCGGT
GGCGATGCCT GGTCGTCGCG CATCCTGCTC GAGGAGATGG GCCTGCGCGT GATCGCCCAG
TGGTCGGGCG ACGGCTCGCT GGCCGAGCTC GAGGCGACGC CGAAGGCGAA GCTCAACGTG
CTGCACTGCT ACCGTTCGAT GAACTACATC TCTCGCCACA TGGAAGAGAA GTTCGGTATT
CCGTGGTGCG AGTACAATTT CTTCGGGCCG AGCAAGATCG CCGAATCGCT GCGCAAGATC
GCCAGCTATT TCGACGACAA GATCAAGGAA GGTGCCGAGC GCGTCATCGC CAAGTACCAG
CCCCTGATGG ACGCCGTGAT CGCCAAGTAC CGGCCGCGCC TCGAAGGCAA GACCGTGATG
CTGTTCGTCG GCGGCCTGCG TCCGCGCCAC GTGATCGGCG CCTATGAGGA CCTCGGCATG
GAGGTCGTGG GCACCGGCTA CGAGTTCGCC CATAATGACG ACTATCAGCG CACCGCCCAG
CACTACGTCA AGGACGGCAC GCTGATCTAT GACGACGTGA CCGGCTACGA GTTCGAGAAG
TTCGTCGAGA AGGTCCAGCC GGACCTCGTC GGCTCGGGCA TCAAGGAAAA GTACGTGTTC
CAGAAAATGG GCGTGCCGTT CCGCCAGATG CACTCCTGGG ACTATTCCGG TCCCTACCAT
GGCTATGACG GGTTCGCGAT CTTCGCCCGC GACATGGACA TGGCCATCAA CTCGCCGGTC
TGGAAGATGA CCAAGGCGCC CTGGAAGCAG GCGCCCAAGC CCTTGCTCCA AGCGGCCGAG
TAA
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| Protein sequence | MSVIEKQSVA EIKARNKELI AEVLKVYPEK TAKRRAKHLN VHESGKSDCG VKSNIKSIPG
VMTIRGCAYA GSKGVVWGPI KDMIHISHGP VGCGQYSWAA RRNYYIGTTG IDTFVTMQFT
SDFQEKDIVF GGDKKLAKIM DEIQELFPLN NGITVQSECP IGLIGDDIEA VSKTKSKEYD
GKTIVPVRCE GFRGVSQSLG HHIANDAIRD WVFDKLPADA APRFEPSDYD VAIIGDYNIG
GDAWSSRILL EEMGLRVIAQ WSGDGSLAEL EATPKAKLNV LHCYRSMNYI SRHMEEKFGI
PWCEYNFFGP SKIAESLRKI ASYFDDKIKE GAERVIAKYQ PLMDAVIAKY RPRLEGKTVM
LFVGGLRPRH VIGAYEDLGM EVVGTGYEFA HNDDYQRTAQ HYVKDGTLIY DDVTGYEFEK
FVEKVQPDLV GSGIKEKYVF QKMGVPFRQM HSWDYSGPYH GYDGFAIFAR DMDMAINSPV
WKMTKAPWKQ APKPLLQAAE
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