Gene BBta_5916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5916 
Symbol 
ID5150001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6133130 
End bp6133456 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content62% 
IMG OID640560641 
Producthypothetical protein 
Protein accessionYP_001241763 
Protein GI148257178 
COG category[S] Function unknown 
COG ID[COG3785] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02097] hemimethylated DNA binding domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.364576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCGGA TGGAGGCGAA ATTCACGATC GGCCAGGTGA CCCGGCACCG CGTCTACGAT 
CTGCGCGGCG TCGTGTTCGA CGTTGACCTG TCGTTCTCCG AAGAAGAGGG CTGGCGCGCC
ATCACCATGG ACGCCAGGCT CGACAAGGAG CAGCCGTTCT ATTACCTGCT CGCCGAGAGC
GGCGACAGCA GCTACATTGC CTATGTCCCC GAGCAGAACC TGCTGCCGGA TGCCTCCGGC
GAGCCGGTCA AGCATCCCGA TATCGGCGAG CTGTTCGATG TCGATGACGA CGGGAGCTAC
CACTACCGCG GGCGGATCTT TCAGTAG
 
Protein sequence
MVRMEAKFTI GQVTRHRVYD LRGVVFDVDL SFSEEEGWRA ITMDARLDKE QPFYYLLAES 
GDSSYIAYVP EQNLLPDASG EPVKHPDIGE LFDVDDDGSY HYRGRIFQ