Gene BBta_5887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5887 
Symbol 
ID5151460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6117019 
End bp6117381 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content67% 
IMG OID640560613 
Producthypothetical protein 
Protein accessionYP_001241735 
Protein GI148257150 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR02945] FeS assembly SUF system protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.135925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.545578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC ACGCCGCGCC CCCTCCCTCC CCGGCTCAGA CCGCCGTCGC AACGGGCTCG 
CAGGATGCCG CCGAGAGCGT CATCGCAGCG CTGCGGACGG TCTATGACCC GGAGATTCCG
GTCAATGTCT ACGACCTCGG GCTGGTCTAT CGGATCGCGC ATGAGGGTGG CGGCGCCGTC
GAGATCGACA TGACGTTGAC GGCGCCTGGC TGCCCGGTCG CGAGCGAGAT CGTCCGCATG
GTGGAGGACG CCGTGCAGGC TGTCGACGGT GTCGCGTCGG TGAAGGTCAC GCTGGTGTTC
GAGCCGCCCT GGGACAAGTC ACGGATGTCG GAAGAGACCG CCTTGGAGCT GGGTTTGCTG
TAA
 
Protein sequence
MSMHAAPPPS PAQTAVATGS QDAAESVIAA LRTVYDPEIP VNVYDLGLVY RIAHEGGGAV 
EIDMTLTAPG CPVASEIVRM VEDAVQAVDG VASVKVTLVF EPPWDKSRMS EETALELGLL