Gene BBta_5879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5879 
SymbolnifH 
ID5151567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6113022 
End bp6113909 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content63% 
IMG OID640560606 
Productnitrogenase reductase 
Protein accessionYP_001241728 
Protein GI148257143 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0809019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.897591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGC TGCGACAAAT CGCATTCTAC GGCAAAGGCG GCATCGGCAA ATCGACGACG 
TCGCAAAACA CCCTGGCCGC GCTGGCCGAG ATGGGTCATC GGATCCTGAT CGTCGGCTGC
GACCCCAAGG CGGATTCGAC CCGCCTGATC CTGCACGCCA AGGCGCAGGA CACCATCCTC
AGCCTGGCCG CTGCCGCGGG CAGCGTCGAG GACCTCGAGA TTGAGGAGGT CATGAAGGTC
GGCTATCGCG ACATCCGTTG CGTCGAGTCC GGCGGTCCGG AGCCGGGCGT CGGCTGCGCC
GGCCGCGGCG TCATCACCTC GATCAACTTC CTGGAAGAGA ACGGCGCCTA TGAGGACATC
GACTACGTGT CCTACGATGT GCTCGGCGAC GTGGTCTGCG GCGGCTTCGC GATGCCGATC
CGTGAGAACA AGGCGCAGGA GATCTACATC GTGATGTCCG GCGAGATGAT GGCGATGTAT
GCCGCCAACA ACATCTCCAA GGGCATTCTG AAATATGCGA ACTCCGGCGG CGTGCGCCTG
GGCGGCCTGG TCTGCAACGA ACGCCAGACC GACAAGGAGC TCGAGCTGGC CGAGGCTCTC
GCCAAGAAGC TCGGCACCCA GCTGATCTAT TTCGTGCCGC GCGACAACAT CGTGCAGCAC
GCCGAGCTGC GCCGCATGAC TGTGCTGGAA TACGCGCCGG AGTCGGTTCA GGCCAACCAC
TACCGCAACC TGGCGACCAA GATCCACGGC AACGCCGGCA AGGGCATCAT CCCGACGCCG
ATCACGATGG ACGAGCTCGA GGACATGCTG ATGGAGCACG GCATCATGAA GGCGGTGGAC
GAGAGCCAGA TCGGAAAGAC TGCCGCCGAA CTCGCCGCAA CGGCTTAA
 
Protein sequence
MASLRQIAFY GKGGIGKSTT SQNTLAALAE MGHRILIVGC DPKADSTRLI LHAKAQDTIL 
SLAAAAGSVE DLEIEEVMKV GYRDIRCVES GGPEPGVGCA GRGVITSINF LEENGAYEDI
DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMAMY AANNISKGIL KYANSGGVRL
GGLVCNERQT DKELELAEAL AKKLGTQLIY FVPRDNIVQH AELRRMTVLE YAPESVQANH
YRNLATKIHG NAGKGIIPTP ITMDELEDML MEHGIMKAVD ESQIGKTAAE LAATA