Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5879 |
Symbol | nifH |
ID | 5151567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6113022 |
End bp | 6113909 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640560606 |
Product | nitrogenase reductase |
Protein accession | YP_001241728 |
Protein GI | 148257143 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0809019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.897591 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCGC TGCGACAAAT CGCATTCTAC GGCAAAGGCG GCATCGGCAA ATCGACGACG TCGCAAAACA CCCTGGCCGC GCTGGCCGAG ATGGGTCATC GGATCCTGAT CGTCGGCTGC GACCCCAAGG CGGATTCGAC CCGCCTGATC CTGCACGCCA AGGCGCAGGA CACCATCCTC AGCCTGGCCG CTGCCGCGGG CAGCGTCGAG GACCTCGAGA TTGAGGAGGT CATGAAGGTC GGCTATCGCG ACATCCGTTG CGTCGAGTCC GGCGGTCCGG AGCCGGGCGT CGGCTGCGCC GGCCGCGGCG TCATCACCTC GATCAACTTC CTGGAAGAGA ACGGCGCCTA TGAGGACATC GACTACGTGT CCTACGATGT GCTCGGCGAC GTGGTCTGCG GCGGCTTCGC GATGCCGATC CGTGAGAACA AGGCGCAGGA GATCTACATC GTGATGTCCG GCGAGATGAT GGCGATGTAT GCCGCCAACA ACATCTCCAA GGGCATTCTG AAATATGCGA ACTCCGGCGG CGTGCGCCTG GGCGGCCTGG TCTGCAACGA ACGCCAGACC GACAAGGAGC TCGAGCTGGC CGAGGCTCTC GCCAAGAAGC TCGGCACCCA GCTGATCTAT TTCGTGCCGC GCGACAACAT CGTGCAGCAC GCCGAGCTGC GCCGCATGAC TGTGCTGGAA TACGCGCCGG AGTCGGTTCA GGCCAACCAC TACCGCAACC TGGCGACCAA GATCCACGGC AACGCCGGCA AGGGCATCAT CCCGACGCCG ATCACGATGG ACGAGCTCGA GGACATGCTG ATGGAGCACG GCATCATGAA GGCGGTGGAC GAGAGCCAGA TCGGAAAGAC TGCCGCCGAA CTCGCCGCAA CGGCTTAA
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Protein sequence | MASLRQIAFY GKGGIGKSTT SQNTLAALAE MGHRILIVGC DPKADSTRLI LHAKAQDTIL SLAAAAGSVE DLEIEEVMKV GYRDIRCVES GGPEPGVGCA GRGVITSINF LEENGAYEDI DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMAMY AANNISKGIL KYANSGGVRL GGLVCNERQT DKELELAEAL AKKLGTQLIY FVPRDNIVQH AELRRMTVLE YAPESVQANH YRNLATKIHG NAGKGIIPTP ITMDELEDML MEHGIMKAVD ESQIGKTAAE LAATA
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