| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5875 |
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| Symbol | nifV |
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| ID | 5151613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 6110235 |
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| End bp | 6111374 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640560602 |
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| Product | homocitrate synthase |
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| Protein accession | YP_001241724 |
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| Protein GI | 148257139 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.295774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGGG TCATCCTGAA CGACACCACG CTCCGCGATG GCGAGCAGGC GCCCGGTGTC
GCCTTCGCGC TCGCGGAGAA GGTCGCGATC GCCCGCGCCC TGGCGCGGGC CGGCGTTCCG
GAGATCGAGG CGGGCACGCC GGCGATGGGG GCCGACGAGA TCGCCGCGAT CCGCGCGATC
GTCGACGCCC GTCTGCCGGC AACCATCATC GGCTGGTGCC GGATGCGCGA GGCGGATGTC
GATGCCGCGA TCGCGGCTGG TGTGTCGATG GTGAATGTCT CCATCCCGAC ATCGGACGTG
CAGATCGCCG CCAAGCTCGG CGGCGACCGC AGTGCTGCGC TGGAACTGCT CAAGCGCGTC
GTTACTTACG CGCGCCAGCG CGGACTGGAT GTGGCCGTCG GCGGCGAGGA TTCGTCGCGC
GCCGATGTCG GCTTCCTGGC AGAGGTCATC GCCACCGCCA AGGCGCTCGG AGCGCGACGC
TTCCGTGTCG CCGATACGCT GAGCGTGCTT GATCCCGACG CGACGTTTGC GCTGGTCAAT
GCCCTGCGCG CGACCACGGA TCTGGAGATC GAGTTTCACG GTCATGACGA TCTCGGCCTC
GCCACCGCCA ACACGCTGGC CGCGGTCAAG GCCGGCGCGA CGCATGCATC GGTCACCGTG
ATCGGCCTCG GCGAGCGCGC CGGGAACGCA CCGCTGGAGG AAGTCGCCGT CGCCCTGCGC
CAGCTTTACC GGCGCGAGAC CGGGATCGTG CTGGCTGAGC TCGATCGTGT CGCCAATGTA
GTCGCAGCCG CCGCGGCGCG TGCCATTCCG CTCAACAAGG CGATCGTCGG CGAGCACGTC
TTCACCCACG AATCCGGCAT TCACGTTGAT GGCCTGCTGA AGGATCAGCG GACCTACCAG
GCGCTCGATC CGATGCTGTT CGGCCGCTCC AACCGAATTG TGATCGGCAA GCATTCCGGC
CTGTCGGCGA TCACCTCGCT GCTGTCGGAT CTGCGCCTGC CGGTGAGCGC CGACCAGGCC
CAGCGGATCC TGGCCCGCGT GCGCAAGCAT GCGGTCGTGC ACAAGGGTCC GGTGCCGAAG
GAAGCCGTCG CCGCCATCTG GCGCGAAGTC TGCGATCACC CGCTAGCGAG CTTTGCCTGA
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| Protein sequence | MPRVILNDTT LRDGEQAPGV AFALAEKVAI ARALARAGVP EIEAGTPAMG ADEIAAIRAI
VDARLPATII GWCRMREADV DAAIAAGVSM VNVSIPTSDV QIAAKLGGDR SAALELLKRV
VTYARQRGLD VAVGGEDSSR ADVGFLAEVI ATAKALGARR FRVADTLSVL DPDATFALVN
ALRATTDLEI EFHGHDDLGL ATANTLAAVK AGATHASVTV IGLGERAGNA PLEEVAVALR
QLYRRETGIV LAELDRVANV VAAAAARAIP LNKAIVGEHV FTHESGIHVD GLLKDQRTYQ
ALDPMLFGRS NRIVIGKHSG LSAITSLLSD LRLPVSADQA QRILARVRKH AVVHKGPVPK
EAVAAIWREV CDHPLASFA
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