Gene BBta_5863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5863 
Symbol 
ID5151116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6100527 
End bp6101081 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content62% 
IMG OID640560590 
Productthioredoxin peroxidase (AhpC, Alkyl hydroperoxide reductase) 
Protein accessionYP_001241712 
Protein GI148257127 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGAA TTGGAAGTAA GCTGCCCTCG TTCGAAATCG TCGGCGTGAA GCCCGGTTTC 
CAGCTTCATG AGGAGAAGGG CGAAAGCGCC TTCGAGACCC TGACCGAAAC CAGCTTTCCT
GGAAAGTGGA AGGTCATCTT CTTCTACCCG AAGGACTTCA CCTTCGTCTG CCCGACGGAG
ATCGCCGAGT TCGCTCGGCT GGCAAAGGAC TTCGAAGACC GCGACGCCGT CGTGCTCGGC
GGCTCCACGG ACAACGAGTT CTGCAAGCTG GCCTGGCGCC GTGACCACAA GGACCTTCAC
AAGCTGCCGA TCTGGCAGTT TGCCGACACC AAGGGGTCGC TGGTCGACGG TCTCGGCGTG
CGCTCGCCCG ACGGCGTGGC CTATCGCTAC ACATTCGTGG TCGATCCCGA CAACACCATT
CAGCACGTCT ATGCGACCAA TCTGAACGTG GGCCGCGCGC CGAAGGACAC GCTGCGGGTG
CTCGACGCGT TGCAGACCGA CGAGCTCTGC CCCTGCAATC GCGAGGTCGG CGGCGCCACT
CTGAAGGTCG CCTGA
 
Protein sequence
MLGIGSKLPS FEIVGVKPGF QLHEEKGESA FETLTETSFP GKWKVIFFYP KDFTFVCPTE 
IAEFARLAKD FEDRDAVVLG GSTDNEFCKL AWRRDHKDLH KLPIWQFADT KGSLVDGLGV
RSPDGVAYRY TFVVDPDNTI QHVYATNLNV GRAPKDTLRV LDALQTDELC PCNREVGGAT
LKVA