Gene BBta_5854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5854 
Symbol 
ID5150383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6091505 
End bp6092512 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content61% 
IMG OID640560581 
Producthypothetical protein 
Protein accessionYP_001241703 
Protein GI148257118 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1840] ABC-type Fe3+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.103507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.680592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCA CCCGCCTCGT TCTTGCGCTG CTCGCGCTGG TCGTCCTGGC GCCGTCGCAG 
CAAGCCAAAG CCGCTGACGT CATCTGCTAC AATTGCCCGC CGGAATGGGC TGATTGGGCC
TCGATGCTCA AGGCCATCAA GACCGATCTC GGCTATGACA TCCCGCACGA CAACAAGAAC
TCCGGCCAGG CGCTGGCCCA GATTCTCGCC GAGAAGAGCA ATCCCGTCGG CGACATCGGC
TATTTCGGCG TCACCTTCGG CATGAAGGCG AAGGCGCAGG ATGCGCTGGA AGCCTATAAG
CCGGCCAATT GGGACCAGGT CCCGGCCGGT CTGAAGGACG CTGACGGCTA TTGGACCACC
ATCCATTCCG GCACGCTCGG CCTGTTCGTG AACAAGGACG CGCTCGGCGG GAAGCCGGTC
CCGGCCTGCT GGAAGGATCT GCTGAAGCCC GACTACAAGG GCATGGTGGG CTATCTCGAT
CCGAGCTCGG CGGCTGTCGG CTATGTCGGC GCTGTCGCGG TCAATCTTGC GCTTGGCGGC
TCGCAGTCCA ATTTCGATCC GGCTCTGAGC TTCTTCAAGG ACCTGCGCAA GAACGATCCG
ATCGTGCCGA AGCAGACGTC CTATGCGCGC GTGGTCTCGG GCGAGATCCC GATTCTGTTC
GACTACGACT TCAACGCCTA CCGCGCAAAA TACACCGAGA AGGGCAATTT CGAGTTTGTG
ATTCCCTGCG AGGGTTCAGT GGTGTTTCCT TACGTCGTCG GCCTGGTGAA GAATGCGCCC
GACAAGGACA AGGCGAAGAA GGTCATCGAC TACCTGCTCT CCGACAAGGG CCAGGCGATC
TGGACGAATG CCTATCTGCG TCCGGCACGT CCGATCGAGC TGCCCGAGGC CGTCAAGACC
AAGTTCCTGC CGGACAGCGA CTACGCCCGT GCCAAGAGCG TCAATTGGGG CGACATGGAA
ACGGCGCAGA AGGCGTTCGT CGACCGTTAT CTGTCCGAGG TCCGCTAA
 
Protein sequence
MKVTRLVLAL LALVVLAPSQ QAKAADVICY NCPPEWADWA SMLKAIKTDL GYDIPHDNKN 
SGQALAQILA EKSNPVGDIG YFGVTFGMKA KAQDALEAYK PANWDQVPAG LKDADGYWTT
IHSGTLGLFV NKDALGGKPV PACWKDLLKP DYKGMVGYLD PSSAAVGYVG AVAVNLALGG
SQSNFDPALS FFKDLRKNDP IVPKQTSYAR VVSGEIPILF DYDFNAYRAK YTEKGNFEFV
IPCEGSVVFP YVVGLVKNAP DKDKAKKVID YLLSDKGQAI WTNAYLRPAR PIELPEAVKT
KFLPDSDYAR AKSVNWGDME TAQKAFVDRY LSEVR