Gene BBta_5853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5853 
Symbol 
ID5150382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6090642 
End bp6091457 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID640560580 
Productputative permease protein 
Protein accessionYP_001241702 
Protein GI148257117 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.784306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.382756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACA AATCCTTCGT CTGGATCTGC CTGTTGCCTT TGGCGGCCGT GACGGCCGCC 
TTCTTTCTGC TGCCGATGGC GCGGCTGCTC GTCACCGGTG CGGAAGGACC ACGCGGGCTG
GCCGAATATC TCGCGATTCT CGTCGAGCCG CGCTACCGCG CCACGCTCGT GAATACGGTG
CTGCTGGCGG CGGCGACCAC CGTCGCGACG TTGATCATCG CAACCATCGC CGGCCTGTTC
CTGCAGCGTC ACCGCTTCCC CGGGCGTGCG GTTCTGGTGG CGATCCTGAC ATTCCCGCTG
GCGTTTCCCG GCGTCGTCAT CGGCTTCATG ATCATCCTGC TGGCCGGCCG CCAGGGGCTG
ATCGGCGACG TCTCGGCGCG CCTGACCGGA GACAAGCTCG TCTTCGCCTA TTCGATCTAT
GGCCTGTTCC TCGGCTACCT CTATTTTTCG ATCCCGCGCG TCATCCTCAC CATCATGGCC
GCGGCGCAGA AGCTCGATCC GGGGCTTGCG GAGGCGGCGC GCTCGCTCGG CGCCGGGCCC
TTCGCCGTGC TGCGCGACGT GATCCTGCCG GGGCTCGCGC CGGCTCTGGT GGCCTCAGGT
GCCATCGCCT TTGCCACGGC CATGGGTGCG TTCGGAACGG CCTTCACTCT GGCCACCAAT
ATCGATGTGC TGCCGATGCT GATCTACACG GAGTTCACTT TGGCCGGAAA TCTCGCGACG
TCGGCGGCGC TATCGGTCGG GCTCGGCGTG ATGACCTGGC TCATCCTGGC GCTGGCGCGC
TCCTTTACCG GCAACTCCGT TGCGGCGGCG GGATAG
 
Protein sequence
MSHKSFVWIC LLPLAAVTAA FFLLPMARLL VTGAEGPRGL AEYLAILVEP RYRATLVNTV 
LLAAATTVAT LIIATIAGLF LQRHRFPGRA VLVAILTFPL AFPGVVIGFM IILLAGRQGL
IGDVSARLTG DKLVFAYSIY GLFLGYLYFS IPRVILTIMA AAQKLDPGLA EAARSLGAGP
FAVLRDVILP GLAPALVASG AIAFATAMGA FGTAFTLATN IDVLPMLIYT EFTLAGNLAT
SAALSVGLGV MTWLILALAR SFTGNSVAAA G