| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5821 |
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| Symbol | |
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| ID | 5150556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6065759 |
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| End bp | 6067057 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640560549 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_001241671 |
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| Protein GI | 148257086 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.836569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.302155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTGC TCGGACAACA CGCCGTATCC TCATCCTCGT CGCCGATCAG GCTGCTAGAT
CGCACCTATG TTGCGTGGGG AACGGTCGCA TTCGCCTATG CGATCGCATT TCTGCAGCGG
ATGTCGCCGC AGACCGTCGG CCTGAGCTTC ATGCGCGATT TCGGCACCGA CGCTTCGGGT
GTCGCGATGC TCGCCTCCAG CTATTTCTGG GGCTACACGT TGATGCAGAT TCCGGCTGGT
CTGCTGGTCG ATCGCTACGG CGTCAAACGC GTCGTGCTGT GCAGCATGGC GGCATCGGTG
GTCGGCAGTC TCGCATTCGC GCTCTCGCCC ACCCTGTTCG ACGTCTTCAT AGCCCGCGTG
ATTGTGGCCT GCGGCGACGC GCTCGTATTC ACCGCGTTGC TGAAGCTGGT CGCGCAGAGC
TTTACAGACG AGCGTTTCGG CCTGATGTCC GGGATCTCCC AAGTCTCTGG CTATGCGGGC
GGCGTCATCG CAACCACGCC GCTCGCAGCC GCCGTCAGCG GCTTCGGTTG GCGTGCCTGC
TTCTTCTTCA TCGCCTGTAT CGGGATCGCC AACCTGGCAT GCGCCTCGGT GGCGCTGAAG
GCCGCGCCAT CGAACAACAA TGGAAGGACG CTGAAGAGCG TCCTGCTGGC GAGTTGGCAG
GCGCTCAGAT CAGCCGCGAA TTGGGGCTGC GCGATGAGCT TCGCGTCGCA TTTCGCGGTG
GTCACGACCC TGGCTGGCGT GTGGGGCATT CCGATGGTGT CGCATTATTT CGGCATTTCA
CCGTCGGCCG CCGGCGCCCC CCTGCTCGCC TTCATGGTCG GAAATGCGAT CGGATCCATC
TTTCTCGGCC ATGCTGCCGA CCGGACGCGG TCGCTGGACT CGGCCTTGAT ACGCATCAGC
CTGCTTCGCA TGCTGCTTGT CGCGATGCTG TGGCCGGCTC TCGCTCATGC ATTTGGCCTT
GTCTATGTGG GCGTGGTGTT TGCCGTGCTG GGCCTGGTCG CAGGCGGCAC GGTTCCCCTG
ATCCTGAAAT GCACGAAGCA TCTCTACACG GTGGAACGTA TCGGTGTCGG GGCCTCGATC
AACACAACCT CGGCAGGCGT GTTCGCAGGA CTCGCGCAGC CCGTCATCGC CTTCGCGATG
ATGGCCGCAA GCGGACTTGG TGCCGGTGAT GGCTCAAGCC TGCACGCCGT CGCAAACGAC
GCCGGCTACG CGACCCTGCT GGCAGCTCTT CTGCTGATGT CCCTGCCGGG CATTTTCGGA
CCACTGATGA TGAGGCCCAG ACTGACACCG AGTACTTAA
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| Protein sequence | MAVLGQHAVS SSSSPIRLLD RTYVAWGTVA FAYAIAFLQR MSPQTVGLSF MRDFGTDASG
VAMLASSYFW GYTLMQIPAG LLVDRYGVKR VVLCSMAASV VGSLAFALSP TLFDVFIARV
IVACGDALVF TALLKLVAQS FTDERFGLMS GISQVSGYAG GVIATTPLAA AVSGFGWRAC
FFFIACIGIA NLACASVALK AAPSNNNGRT LKSVLLASWQ ALRSAANWGC AMSFASHFAV
VTTLAGVWGI PMVSHYFGIS PSAAGAPLLA FMVGNAIGSI FLGHAADRTR SLDSALIRIS
LLRMLLVAML WPALAHAFGL VYVGVVFAVL GLVAGGTVPL ILKCTKHLYT VERIGVGASI
NTTSAGVFAG LAQPVIAFAM MAASGLGAGD GSSLHAVAND AGYATLLAAL LLMSLPGIFG
PLMMRPRLTP ST
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