Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5819 |
Symbol | darR |
ID | 5149352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6063968 |
End bp | 6064984 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560547 |
Product | transcriptional regulator |
Protein accession | YP_001241669 |
Protein GI | 148257084 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.321081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.280114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCGA ATTCTGCCAA GTCCCGGCGC GCAGCTCTGC CACCAGACGC CACCGAAAGA CGGTTGGTCA TCGTGGCCTT TCCAGGCGTG ACGCTACTGG ACGTGTCCGG GCCGGCCCAG GTGTTCGCCG AACTCGCCGA CATCGAACTG CCGCGCCCAG GCTATGCACT GAGCTACGTC TCGAAGCACG GCGGTCTGGT GCCTACAGAC GTCGGACTGA TGATCGATAC TGCCCCGATG ACGGCCATCG ATCCGCGTGA GGTCGACACG CTGCTAATTC CGGGCGGGCC GGGCATCTGG AAGTTGCGCC AGGACGAGGC GCTGATGCGA TGGATTGGTC AGGCGTTGCC CGATGCCCGG CGGATCGCCT CGGTGTGCCT TGGCGCGTTC GCACTGGCAT GGGCGGGAGC GCTCGAGGGC AAACGCGCTG CGACCCATTG GCGCTATTGT CCGCGATTGC AGGACAGTTT TCCCAATGTG AAGGTCGAGC CGGACGCGAT CTTCGTCCAG GATGGGCGCG TCTGGTCCTC GGCGGGCGTC AGCGCCGGGA TCGATCTCGC GCTGGCCATG ATCGAGGAGG ATTTCGGTCA TACGATCGCG CTCGACGTGG CTCGGCGGCT GGTCGTCTTC CTCAAGCGTC CCGGCGGCCA AAGCCAGTTC TCCACCGTGT TGGCCGCGCA GGCCTCCGAC GTCGAGGGGC GATTCAGCGC GCTGCATGCC TGGATCATCG AGAACATCGC GAGCGATCTG CGCGTCGAGA CGCTGGCCGC AAAGGCCGGC ATGTCGCCGC GCACATTCGC CCGCACCTAT GTCAGCCGAA CGGGCATGAC GCCTGCGCAG GGCGTGGAGG CGCTCAGGGT CGAGACGGCG CGACTCCTGC TCGAAAGTCG CCAGGTGGGG AGCGTGGTCG AGGTCGCGCA AAGGGCCGGC TTCGGTGATG ACGAGCGCAT GCGCCGCGCG TTCCTGAGGC ACCTCGGCGT CTCGCCTTCG GAGTACCGCC GCCGCTTCTC GGGCTGA
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Protein sequence | MPSNSAKSRR AALPPDATER RLVIVAFPGV TLLDVSGPAQ VFAELADIEL PRPGYALSYV SKHGGLVPTD VGLMIDTAPM TAIDPREVDT LLIPGGPGIW KLRQDEALMR WIGQALPDAR RIASVCLGAF ALAWAGALEG KRAATHWRYC PRLQDSFPNV KVEPDAIFVQ DGRVWSSAGV SAGIDLALAM IEEDFGHTIA LDVARRLVVF LKRPGGQSQF STVLAAQASD VEGRFSALHA WIIENIASDL RVETLAAKAG MSPRTFARTY VSRTGMTPAQ GVEALRVETA RLLLESRQVG SVVEVAQRAG FGDDERMRRA FLRHLGVSPS EYRRRFSG
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