Gene BBta_5813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5813 
Symbol 
ID5149886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6060205 
End bp6061362 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content61% 
IMG OID640560541 
Producthypothetical protein 
Protein accessionYP_001241663 
Protein GI148257078 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.161405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGTCA ATGATCGTGG TCTGGTTTGC GCGACGACGG GCGCGGTCGA CGCGGCACGA 
GATTGCCGCG ATCTGCGCCT CGACGCCTGC CGAGGTCTCG CGCTCTGGTT CATTTTTGTC
GATCACGTGC CGGACAACTC GCTGTCCTGG CTGACGCCGC GGAATTATGG CTTCAGCGAT
ACGTCTGAGG TGTTCGTTTT CATCTCCGGC TACACTTGCA TGCTGGCTTA TGGCGGAGCA
TTGGCGGCGC AAGGCTGGGC GACGACGGTG GTGCGTGCGC TGCGGCGAGC GTGGGAGATC
TATGCGGCCT TTCTCGTGCT GCTGCTCGCT TATGCGGCGC TGGTCTGGGT CGTCGGCAAT
GGCGAGCGCT TCGTCGACGA GACGAATACG GGCTTTTTCT TTCGCGATCC CGGGCCCACG
CTCGTGCATG TCGCGCTGCT GCAGTTCGCA CCCGTCAACA CCGATATCCT GCTGACCTTC
GCGATCCTGC ACATCTGCTT TCCCGTCGTC CTGTGGATGA TGATGACCAG CCCGACCTTC
ACGCTGGTGA TATCGTTCCT GCTTTACATG ATGGTCCAAC TGTTCAGCTG GCAGGTGCCG
GCTTGGCCGA GCGGCGAACT CTACTTCAAT CCGTTCGCCT GGCAGTTCCT GTTCGTCATC
GGCGCCTGGT ATGCCTATGT CGGCTCCGCA AGTCTGCGGC CGATCCTGAA CTCGCGCACG
CTCCTGATCG TCGCGCTTGC CTACCTTGCC TTCAGCCTTT TCATGGCTCT GAGCTGGGAG
TTCAAGAGTC TGGAGGCATT GATCCCGTCG GCCGTCACCG GCCTGATCTA TCCGATCTAC
AAGAGCCATC TGGCGCCGGT GCGGCTGCTC CACTTTCTCT CGCTGGCTCT CGTCGTATCG
CGGCTGACAC CGCCGCAATG GAACGGCCCG GCCCGCCCGC TGATGACGGC GATCATCCGA
TGCGGGGAAA ACTCGCTTTC CATCTATTGC ATCGGGGTGC TGCTGGCGTT TATCGGGCAG
GTCGTGTTGA CTGATGTCTC CAGCGGTTTT GCCATGCAGC TGCTGATCAG CATCGCAGGA
ATTGCCGTGA TGGTCATCGC AGCCACGCTG CTGACCTGGG AAACGCAGCT CGATCGGCGC
GGACCAAGGC TGTTTTGA
 
Protein sequence
MDVNDRGLVC ATTGAVDAAR DCRDLRLDAC RGLALWFIFV DHVPDNSLSW LTPRNYGFSD 
TSEVFVFISG YTCMLAYGGA LAAQGWATTV VRALRRAWEI YAAFLVLLLA YAALVWVVGN
GERFVDETNT GFFFRDPGPT LVHVALLQFA PVNTDILLTF AILHICFPVV LWMMMTSPTF
TLVISFLLYM MVQLFSWQVP AWPSGELYFN PFAWQFLFVI GAWYAYVGSA SLRPILNSRT
LLIVALAYLA FSLFMALSWE FKSLEALIPS AVTGLIYPIY KSHLAPVRLL HFLSLALVVS
RLTPPQWNGP ARPLMTAIIR CGENSLSIYC IGVLLAFIGQ VVLTDVSSGF AMQLLISIAG
IAVMVIAATL LTWETQLDRR GPRLF