Gene BBta_5810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5810 
Symbol 
ID5149717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6057011 
End bp6058642 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content65% 
IMG OID640560539 
Productmalate dehydrogenase 
Protein accessionYP_001241661 
Protein GI148257076 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.414547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.345135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC CGACGCTCCC CACCTACTCC CCTCGCGGGC TTGCGCTGCT GCGTGATCCC 
CTGCTCAACA AGGGGACAGG ATTCACCGAG CAGGAGCGCG ATGCGCTTGG GCTGCGCGGC
TTCCTCCCAG CGGGTGTCCT GTCGATGCAG GCGCAAGCCG AGCGCATCCT CGTCAACCTC
CGCAGCCTGC CCAGTGATCT GGAGAAATAT GTCGCGCTCA ATGCGCTGCA CGATCGCAAC
GAGGCGCTGT TCTTCCGGGT GGTCTGCGAC AACATCGACG AGATCCAGCC GCTGATCTAC
ACACCGACGG TCGGCCTCGC CTGTCAGAAA TACGGCCTGA TCTTCCAGCG GCCGCGCGGC
CTGTTCATCT CGGCCAATGA CCGCGGCCGA ATTGCCGAGA TCCTCGCCAA CTGGCCGTAC
CGCGCCAAGC TCATCGTCGT CACCGACGGC GAGCGCATTC TCGGCCTCGG CGACCTCGGC
GCCAACGGCA TGGGCATTCC TGTCGGCAAG CTCTCGCTCT ACTCGGCCTG TGCCGGCATC
CATCCCGAAG AGTGCCTTCC GGTCATGCTG GACGTCGGCA CCAACAATGA GGAGTTCCTC
AAGGACCCCT ATTATATCGG CCTCCGTCAG AAACGCATCA CCGGCGCAGC CTATGACGAG
TTCGTCGACG AGTTCATGAC CGCCGCGCGC GCGGCCTTCC CGGGCGTGCT GATCCAGTTC
GAGGATTTCG CCAACCACGC GGCTTTCAAG CTGCTGCACA AATACCGCGA CGACGCCTGC
GTCTTCAACG ACGACATCCA GGGAACGGCG GCGGTCGCGC TGGCCGGTCT GTTTTCCGCG
CTGCGCATCA CCGGCGGTCG CCTTCGCGAT CAGCGCGTGC TGTTCCTGGG CGCCGGCGAG
GCAGCCACGG GGATTGCCGA TCTCGTCGTC TCGGCCATGA TGGCGGAAGG CCTGTCCGAA
GCCGAGGCGC TACAACGCAA CTGGCTCACG GACTCGCGCG GGCTCGTGGT CAAGGGACGT
GAGAACCTGC ACGGTCACAA ATTGCGCTAC GCTCATGAGC AGGCACCGAT CGGAGACTTC
CTGACCTCGA TCAGGACGCT GAAGCCGACG GCGATCATCG GCGTTGCCGC GGTCGGCGGC
GCCTTCACGC CGGAAGTGCT GCAAGCGATG GCGGAGCTGA ACGAGCGGCC GATCATCTTT
GCCCTGTCGA ACCCGACCTC GAAGGCGGAA TGCTCGGCGG AGGCGGCCTA TCGTTACACC
CAGGGCCGCG CATTGTTTGC CTGCGGAAGC CCCTACGATC CGGTCAAGCT CGATGGCAAG
ACCTTCGTGC CCCGGCAGGG CAACAACTCC TACATCTTCC CCGGTGTGGG CCTTGGCGCG
ATCGCCAGCG GGGCGCGCCT GGTGACGGAC GAAATGTTCA TGGCCGCCGC ACACACACTC
GCGAACTGCG TGACCGGCGC TGATCTCGAA CAAGGAAGCC TTTATCCGGC GCTGCCGCGG
ATCCGCGAAG TCTCCGCCCT GATCGGCGCC GCAGTGGCGG GCGTGGCCTA TCAGAACGGG
CTCGCCTCCG GACCGGCGCC GAACGACCTG CTCGGTTTCG TCGAGCAGAA GATGTACGAC
CCGCGCTACT GA
 
Protein sequence
MTAPTLPTYS PRGLALLRDP LLNKGTGFTE QERDALGLRG FLPAGVLSMQ AQAERILVNL 
RSLPSDLEKY VALNALHDRN EALFFRVVCD NIDEIQPLIY TPTVGLACQK YGLIFQRPRG
LFISANDRGR IAEILANWPY RAKLIVVTDG ERILGLGDLG ANGMGIPVGK LSLYSACAGI
HPEECLPVML DVGTNNEEFL KDPYYIGLRQ KRITGAAYDE FVDEFMTAAR AAFPGVLIQF
EDFANHAAFK LLHKYRDDAC VFNDDIQGTA AVALAGLFSA LRITGGRLRD QRVLFLGAGE
AATGIADLVV SAMMAEGLSE AEALQRNWLT DSRGLVVKGR ENLHGHKLRY AHEQAPIGDF
LTSIRTLKPT AIIGVAAVGG AFTPEVLQAM AELNERPIIF ALSNPTSKAE CSAEAAYRYT
QGRALFACGS PYDPVKLDGK TFVPRQGNNS YIFPGVGLGA IASGARLVTD EMFMAAAHTL
ANCVTGADLE QGSLYPALPR IREVSALIGA AVAGVAYQNG LASGPAPNDL LGFVEQKMYD
PRY