Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5810 |
Symbol | |
ID | 5149717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6057011 |
End bp | 6058642 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640560539 |
Product | malate dehydrogenase |
Protein accession | YP_001241661 |
Protein GI | 148257076 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.414547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.345135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC CGACGCTCCC CACCTACTCC CCTCGCGGGC TTGCGCTGCT GCGTGATCCC CTGCTCAACA AGGGGACAGG ATTCACCGAG CAGGAGCGCG ATGCGCTTGG GCTGCGCGGC TTCCTCCCAG CGGGTGTCCT GTCGATGCAG GCGCAAGCCG AGCGCATCCT CGTCAACCTC CGCAGCCTGC CCAGTGATCT GGAGAAATAT GTCGCGCTCA ATGCGCTGCA CGATCGCAAC GAGGCGCTGT TCTTCCGGGT GGTCTGCGAC AACATCGACG AGATCCAGCC GCTGATCTAC ACACCGACGG TCGGCCTCGC CTGTCAGAAA TACGGCCTGA TCTTCCAGCG GCCGCGCGGC CTGTTCATCT CGGCCAATGA CCGCGGCCGA ATTGCCGAGA TCCTCGCCAA CTGGCCGTAC CGCGCCAAGC TCATCGTCGT CACCGACGGC GAGCGCATTC TCGGCCTCGG CGACCTCGGC GCCAACGGCA TGGGCATTCC TGTCGGCAAG CTCTCGCTCT ACTCGGCCTG TGCCGGCATC CATCCCGAAG AGTGCCTTCC GGTCATGCTG GACGTCGGCA CCAACAATGA GGAGTTCCTC AAGGACCCCT ATTATATCGG CCTCCGTCAG AAACGCATCA CCGGCGCAGC CTATGACGAG TTCGTCGACG AGTTCATGAC CGCCGCGCGC GCGGCCTTCC CGGGCGTGCT GATCCAGTTC GAGGATTTCG CCAACCACGC GGCTTTCAAG CTGCTGCACA AATACCGCGA CGACGCCTGC GTCTTCAACG ACGACATCCA GGGAACGGCG GCGGTCGCGC TGGCCGGTCT GTTTTCCGCG CTGCGCATCA CCGGCGGTCG CCTTCGCGAT CAGCGCGTGC TGTTCCTGGG CGCCGGCGAG GCAGCCACGG GGATTGCCGA TCTCGTCGTC TCGGCCATGA TGGCGGAAGG CCTGTCCGAA GCCGAGGCGC TACAACGCAA CTGGCTCACG GACTCGCGCG GGCTCGTGGT CAAGGGACGT GAGAACCTGC ACGGTCACAA ATTGCGCTAC GCTCATGAGC AGGCACCGAT CGGAGACTTC CTGACCTCGA TCAGGACGCT GAAGCCGACG GCGATCATCG GCGTTGCCGC GGTCGGCGGC GCCTTCACGC CGGAAGTGCT GCAAGCGATG GCGGAGCTGA ACGAGCGGCC GATCATCTTT GCCCTGTCGA ACCCGACCTC GAAGGCGGAA TGCTCGGCGG AGGCGGCCTA TCGTTACACC CAGGGCCGCG CATTGTTTGC CTGCGGAAGC CCCTACGATC CGGTCAAGCT CGATGGCAAG ACCTTCGTGC CCCGGCAGGG CAACAACTCC TACATCTTCC CCGGTGTGGG CCTTGGCGCG ATCGCCAGCG GGGCGCGCCT GGTGACGGAC GAAATGTTCA TGGCCGCCGC ACACACACTC GCGAACTGCG TGACCGGCGC TGATCTCGAA CAAGGAAGCC TTTATCCGGC GCTGCCGCGG ATCCGCGAAG TCTCCGCCCT GATCGGCGCC GCAGTGGCGG GCGTGGCCTA TCAGAACGGG CTCGCCTCCG GACCGGCGCC GAACGACCTG CTCGGTTTCG TCGAGCAGAA GATGTACGAC CCGCGCTACT GA
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Protein sequence | MTAPTLPTYS PRGLALLRDP LLNKGTGFTE QERDALGLRG FLPAGVLSMQ AQAERILVNL RSLPSDLEKY VALNALHDRN EALFFRVVCD NIDEIQPLIY TPTVGLACQK YGLIFQRPRG LFISANDRGR IAEILANWPY RAKLIVVTDG ERILGLGDLG ANGMGIPVGK LSLYSACAGI HPEECLPVML DVGTNNEEFL KDPYYIGLRQ KRITGAAYDE FVDEFMTAAR AAFPGVLIQF EDFANHAAFK LLHKYRDDAC VFNDDIQGTA AVALAGLFSA LRITGGRLRD QRVLFLGAGE AATGIADLVV SAMMAEGLSE AEALQRNWLT DSRGLVVKGR ENLHGHKLRY AHEQAPIGDF LTSIRTLKPT AIIGVAAVGG AFTPEVLQAM AELNERPIIF ALSNPTSKAE CSAEAAYRYT QGRALFACGS PYDPVKLDGK TFVPRQGNNS YIFPGVGLGA IASGARLVTD EMFMAAAHTL ANCVTGADLE QGSLYPALPR IREVSALIGA AVAGVAYQNG LASGPAPNDL LGFVEQKMYD PRY
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