| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5785 |
|---|
| Symbol | |
|---|
| ID | 5149422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 6031637 |
|---|
| End bp | 6032599 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640560516 |
|---|
| Product | putative phage major head protein |
|---|
| Protein accession | YP_001241638 |
|---|
| Protein GI | 148257053 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.53306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.339689 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAC CCACGTCCAC CTTCGTTACC TACCAGGCGG TCGGCAACCG TGAAGACCTC
AGCGACATGA TCTACCGCAT CGATCCGGTC GACACGCCGT TCATGAGCGG CGTCGACAAG
GAGAAGGCGA CGGCCGTCAA TCACGAATGG CAAACCCAGG CGCTGGCGCC GGCCGACGGC
ACCAATGCCC AGCTCGAAGG CGACGACCCC AACACCAACG TGACCACGCC GACCGTTCGC
CTCGGCAATC AGTGCCAGAT CTCCTACAAG GTCGCGCGTG TCTCCGGCAC CCAGCAGGCG
GTTGACCATG CCGGTCGCGA CAACGAGCTC GCCTATCAGG AGATGCTCAA GGGCCTCGAG
CTCAAGCGCG ATCTTGAGAC CATCCTTTGC GGCACCAACC AAGCCAAGGT GGTCGGCAAC
ACGACGACGC CGCGCAAGAC CGCGTCCATC CTGTCCTGGA TCGTCTCGAA CACGTCGAAG
GGCACGGCCG GCGGCGCTGC CGATCCCACC GCCGCCGACG GCACGGGCAC GCGCACCGAC
GGCACCCAGA TCGCCTTCAC CGAGGCGCGG CTGAAGACGG TGCTGTCGTC CATCTGGATC
AACGGCGGCA AGCCGGGCAC GATCCTGACC GGCGCCTTCA ACAAGCAGGT GTTCTCGACC
TTCACCGGTC GCTCGACCGC GATCGAGGAG GCCAAGTCGA AGAAGATCGT GGCCTCCGTC
GATGCCTATG AGTCCGATTT CGGCAAGCTC AAGGTGGTCG CCAGCCGCTT CCAGCGCGCG
CGCGACGTGC TCGTGCTGGA GATGGACAAA TGGGCCGTGG CCTATCTCAA CGGTCGCAAC
ATGATCTCCA TCCCGCTGGC CAAGACCGGG GATTCCGACC GGCGGCAGAT CCTTGCCGAA
TATGCCCTGG TCGCGCGCAA CGAGAAGGCC AGCGGTGGCA TCTTCGACAA CACCGTTGCT
TAG
|
|---|
| Protein sequence | MTTPTSTFVT YQAVGNREDL SDMIYRIDPV DTPFMSGVDK EKATAVNHEW QTQALAPADG
TNAQLEGDDP NTNVTTPTVR LGNQCQISYK VARVSGTQQA VDHAGRDNEL AYQEMLKGLE
LKRDLETILC GTNQAKVVGN TTTPRKTASI LSWIVSNTSK GTAGGAADPT AADGTGTRTD
GTQIAFTEAR LKTVLSSIWI NGGKPGTILT GAFNKQVFST FTGRSTAIEE AKSKKIVASV
DAYESDFGKL KVVASRFQRA RDVLVLEMDK WAVAYLNGRN MISIPLAKTG DSDRRQILAE
YALVARNEKA SGGIFDNTVA
|
|---|
| |