Gene BBta_5726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5726 
Symbol 
ID5155844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5975849 
End bp5976835 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content61% 
IMG OID640560462 
Producthypothetical protein 
Protein accessionYP_001241584 
Protein GI148256999 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00555624 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAACC TGATCAAAAT CGCGGCCGCA ACGGCGGTTC TTTTCGGAAG TGCGCCGGCC 
TTTGCCGGCT GGGAACCGAC CAAGCCGGTC GAAATCGTCG TGGCTGCGGG CGCCGGTGGC
GCATCCGACC AGATGGCCCG CATGATGCAG GCTGCGATCC AGAAGAACAA TCTGCTGAAG
CAACCGGTCG TCGTGTCGCT GAAGGGCGGG GCGTCCGGAG CCGAGGCGCT GATGTACATG
AAGTCCAGCG ATGGTGACGC CAACAAGGTC CTGATCGCCT ATTCGTTGAT CTATATGCTG
CCGCTGTCGG CCAAGCTGCC GTTCGACTGG CATGAGCTGT CGCCGGTCGC GGTGATCGCG
CTCGACCAGT TCGTGTTGTG GGACAATGTC AATGGTCCGA AGACGGTGAA GGAGTTCATC
GAAGCCGCCA AGGCATCGAG CTCGCCGTTC AAGCTGGGCG GCACCGGCTC GAAGCGCGAG
GATCACGTGC TCACCGTGTT CCTGGAGAAG AAGACCGGCG CGAAATTCTC CTATCTGCCT
TACAAGTCGG GCGGCGAGGC TGCGACGCAA CTGGTCGGCG GCCATACCGA GGCGAACGTC
AACAATCCCT CCGAGAACCT GGAGGTCTGG CGCGCCGGCC AGGTGCGTCC GCTCTGCGTG
TTCGACAAGG AGCGCATCTC CTACACCGCC AAGGTCACGG AGACGCAGTC CTGGAATGAC
ATTCCGACCT GCAAGGAGCA GGGCCTGGAC GTGCAGTACC TGATGCTGCG CGCGATGTTC
TTGCCAGGCA AGGTGACCCA GGAGCAGCAG GAGTTCTACG TCGACCTGTT CAGCAAGCTG
GTGCAGACGC CGGAATACAG GGACTACATG GAGAAGCAGG CGCTCAAGCC GATCTTCCTT
ACCGGCAAGG ACATGGTGCA GTTCCTGGAA GAGGACGGCT CGCTGAACAA GCAACTGATG
ACGGAAGCCG GCTTCGTCGC CAAGTGA
 
Protein sequence
MRNLIKIAAA TAVLFGSAPA FAGWEPTKPV EIVVAAGAGG ASDQMARMMQ AAIQKNNLLK 
QPVVVSLKGG ASGAEALMYM KSSDGDANKV LIAYSLIYML PLSAKLPFDW HELSPVAVIA
LDQFVLWDNV NGPKTVKEFI EAAKASSSPF KLGGTGSKRE DHVLTVFLEK KTGAKFSYLP
YKSGGEAATQ LVGGHTEANV NNPSENLEVW RAGQVRPLCV FDKERISYTA KVTETQSWND
IPTCKEQGLD VQYLMLRAMF LPGKVTQEQQ EFYVDLFSKL VQTPEYRDYM EKQALKPIFL
TGKDMVQFLE EDGSLNKQLM TEAGFVAK