Gene BBta_5713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5713 
Symbol 
ID5155438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5961607 
End bp5962281 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID640560450 
Producttranscriptional regulator 
Protein accessionYP_001241572 
Protein GI148256987 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.590376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTCCT CCGACACCCT GCTGCGCATC GCGCCCTGGT CGCGCCATCT CAAGCCCGAG 
GAGATCGACG CTGCCTCGGC CGGCATCGTC GAGCGCTCCT TTGCGGCCAA CGAGCACATC
TTTTTGCGTG GCGATCAGTT CGATTATTGG ACGGGCATCG TCTCGGGTCT GGCCCGCATG
AGCACGGTAT CGCGGGGCGG CAAGGCGACG ACGTTTGCGG GCATGTCGGC CGGCGCCTGG
TTCGGCGAGG GCAGCGTGCT CAAGAACGAG CCGCGCCGCT ACGACGTGGT CGCGCTGCGC
GATACCCGCG CGGCGCTGAT GGAGCGGCAG ACCTTCATGT GGCTGTTCGA GAACAGCGTC
GGCTTCAACC GCTTTCTGGT CACTCAGCTC AACGAGCGGC TCGGCCAGTT CATTGGCCTC
GTCGAGGTCG GCCGCACGCT GGATGCGACG GCGCGGCTGG CCCGCAGCAT TGCCGCGCTC
TTCAACCCGA TCCTCTACCC CAACACGACC CGTCACCTCG AAATCACCCA GGAGGAGATC
GGGGCACTCT CCGGCCTGTC GCGGCAGAAC GCCAATCAAT GCCTCAAGAC CTTGGAGCGC
GACGGCCTGT TGCGGGTGGA ATATGGCGGG GTGACCGTGC TCGATCTCGA CCGCCTGCGC
TGCTACGGGG ATTAG
 
Protein sequence
MISSDTLLRI APWSRHLKPE EIDAASAGIV ERSFAANEHI FLRGDQFDYW TGIVSGLARM 
STVSRGGKAT TFAGMSAGAW FGEGSVLKNE PRRYDVVALR DTRAALMERQ TFMWLFENSV
GFNRFLVTQL NERLGQFIGL VEVGRTLDAT ARLARSIAAL FNPILYPNTT RHLEITQEEI
GALSGLSRQN ANQCLKTLER DGLLRVEYGG VTVLDLDRLR CYGD