| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5706 |
|---|
| Symbol | |
|---|
| ID | 5150044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5954667 |
|---|
| End bp | 5955536 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640560443 |
|---|
| Product | putative high-affinity branched-chain amino acid transport system permease protein |
|---|
| Protein accession | YP_001241565 |
|---|
| Protein GI | 148256980 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.407647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.956551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA TCCTCACCAA TCTGTTCGAC GGCGTCGCCT ATGGCATGCT GCTGTTCGTG
CTGGCCTGCG GGCTGGCCGT GACGCTCGGC CTGATGAACT TCGTCAATCT GGCGCATGGC
GCCTTCGCCA TGGCCGGCGG CTATGTCTGT GCCGTGCTGG TCAACCGGGT CGGCTGGCCG
TTCTTCGCCG CGCTGCCGCT GGCTTTCGTC GCGAGCGCCG TGATCGGGGC GCTGCTGGAG
CGGACCCTTT ATCAGCATCT CTATGCGCGC AGCCATCTCG ATCAGGTCTT GTTCTCGATC
GGGCTGGTGT TCATGACGGT CGCCACGGTC GACTACATCA TGGGCTCGTC GCGCATCTTC
ATCAAACTGC CCGAGATTCT GCAGGGCCAG TTCGACATCT TCGGCGTCGG CATCGGCCGC
TATCGGCTGA TGATCATCGT GATCTGCGGC CTGCTCACGG TGGGGCTGCA ACTCGTGCTG
TCCAAGACCC GGTTCGGCAG CCGGCTGCGC GCCGCGGTCG ATGATCCGCG CGCCGCCAGC
GGCCTCGGCA TCAATGTGCC GCAGGTCTTT GCCTTCACTT TCGCCTTCGG CTGCGGGCTC
GCCGGCCTCG GCGGCGCACT CAGCGCGGAA ATCCTCGGCC TCGATCCATA TTTCCCGCTG
AAGTTCATGA TCTACTTCCT GATCGTGGTC ACTGTCGGCG GCTCGTCCTC GATCACCGGG
CCGTTCCTGG CTTCGCTGCT GCTTGGCGTC GCAGACGTCG CCGGGAAATA TTACGTGCCG
AAGCTCGGCC CATTCGTCAT CTACACCATC ATGATCGTGA TCCTGATCTG GCGCCCGAAC
GGCCTGTTCG GTCGCACGGC GACGCGGTGA
|
|---|
| Protein sequence | MTAILTNLFD GVAYGMLLFV LACGLAVTLG LMNFVNLAHG AFAMAGGYVC AVLVNRVGWP
FFAALPLAFV ASAVIGALLE RTLYQHLYAR SHLDQVLFSI GLVFMTVATV DYIMGSSRIF
IKLPEILQGQ FDIFGVGIGR YRLMIIVICG LLTVGLQLVL SKTRFGSRLR AAVDDPRAAS
GLGINVPQVF AFTFAFGCGL AGLGGALSAE ILGLDPYFPL KFMIYFLIVV TVGGSSSITG
PFLASLLLGV ADVAGKYYVP KLGPFVIYTI MIVILIWRPN GLFGRTATR
|
|---|
| |