Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5682 |
Symbol | |
ID | 5150305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5929721 |
End bp | 5930521 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560419 |
Product | putative pilus assembly protein cpaB |
Protein accession | YP_001241541 |
Protein GI | 148256956 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.212256 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGACCG CACGCATCGT GGTGTTGACC ATCGCTCTCG GCGCAGGCGG CGTCGCGGCC TATCTCGTCA GCACCTCGGA AAGCCAGCAG CCTGTTGCCG TCGCGCCGGT CGCGCAGCTG CCGACGGTCG AGGTACTGGT CGCCAAGAAC GACATCGGCC TTGGACAGGC GATCAAGCCC GGCGACCTCG TCTGGCAGAC CTGGCCGGAA GCGGCGAGCA ACATCTTCAT CCGCCGCGGC GATCGTCCGG AAGCCGCCAA CCAGCTCGTT GGCACCATCG CGCGCGCGCC GTTCGTGATC GGCGAGCCGA TCCGCGAGCA GAAGCTGGTG AAGTCCGATG GATCGGGCTT CATGGCGGCG ATCCTGCCTG CGGGCATGCG CGCGATCTCC ACCGAGATAT CGCCCGAAAC CGGCGCCGGC GGCTTCATCC TGCCGAACGA CCGCGTCGAC GTCATCCTGT CGAAGCGCGA CAAGAACCCG GACAAGCCTG GCGGGCCGGA CTACGTCAGC TCCGAAATCA TTCTCTCCAA TGTGCGCGTG CTCGCGATCG ACCAGGCGCC GAAGGAGAAG GAAGGCCAGA ACACGGTGGT CGGCAAGACG GTCACGCTCG AGCTCAAGCC CGAGCAGGCC GAGACGCTGG CGCGCGCGCG ACAGTCCGGC TCGCTGGCGC TGGCGTTGCG CAGCATCGCC GACGTGAACG CGGCCGACGG CAACAAGAAC GAGACGCAGA TGGCGCGACG GGGCAACGCC ATCGAGATCA TTCGCTACGG GATCACCAGC TCGCTCACGG CGCAGAAGTG A
|
Protein sequence | MMTARIVVLT IALGAGGVAA YLVSTSESQQ PVAVAPVAQL PTVEVLVAKN DIGLGQAIKP GDLVWQTWPE AASNIFIRRG DRPEAANQLV GTIARAPFVI GEPIREQKLV KSDGSGFMAA ILPAGMRAIS TEISPETGAG GFILPNDRVD VILSKRDKNP DKPGGPDYVS SEIILSNVRV LAIDQAPKEK EGQNTVVGKT VTLELKPEQA ETLARARQSG SLALALRSIA DVNAADGNKN ETQMARRGNA IEIIRYGITS SLTAQK
|
| |