| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5682 |
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| Symbol | |
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| ID | 5150305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5929721 |
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| End bp | 5930521 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560419 |
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| Product | putative pilus assembly protein cpaB |
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| Protein accession | YP_001241541 |
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| Protein GI | 148256956 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.212256 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCG CACGCATCGT GGTGTTGACC ATCGCTCTCG GCGCAGGCGG CGTCGCGGCC
TATCTCGTCA GCACCTCGGA AAGCCAGCAG CCTGTTGCCG TCGCGCCGGT CGCGCAGCTG
CCGACGGTCG AGGTACTGGT CGCCAAGAAC GACATCGGCC TTGGACAGGC GATCAAGCCC
GGCGACCTCG TCTGGCAGAC CTGGCCGGAA GCGGCGAGCA ACATCTTCAT CCGCCGCGGC
GATCGTCCGG AAGCCGCCAA CCAGCTCGTT GGCACCATCG CGCGCGCGCC GTTCGTGATC
GGCGAGCCGA TCCGCGAGCA GAAGCTGGTG AAGTCCGATG GATCGGGCTT CATGGCGGCG
ATCCTGCCTG CGGGCATGCG CGCGATCTCC ACCGAGATAT CGCCCGAAAC CGGCGCCGGC
GGCTTCATCC TGCCGAACGA CCGCGTCGAC GTCATCCTGT CGAAGCGCGA CAAGAACCCG
GACAAGCCTG GCGGGCCGGA CTACGTCAGC TCCGAAATCA TTCTCTCCAA TGTGCGCGTG
CTCGCGATCG ACCAGGCGCC GAAGGAGAAG GAAGGCCAGA ACACGGTGGT CGGCAAGACG
GTCACGCTCG AGCTCAAGCC CGAGCAGGCC GAGACGCTGG CGCGCGCGCG ACAGTCCGGC
TCGCTGGCGC TGGCGTTGCG CAGCATCGCC GACGTGAACG CGGCCGACGG CAACAAGAAC
GAGACGCAGA TGGCGCGACG GGGCAACGCC ATCGAGATCA TTCGCTACGG GATCACCAGC
TCGCTCACGG CGCAGAAGTG A
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| Protein sequence | MMTARIVVLT IALGAGGVAA YLVSTSESQQ PVAVAPVAQL PTVEVLVAKN DIGLGQAIKP
GDLVWQTWPE AASNIFIRRG DRPEAANQLV GTIARAPFVI GEPIREQKLV KSDGSGFMAA
ILPAGMRAIS TEISPETGAG GFILPNDRVD VILSKRDKNP DKPGGPDYVS SEIILSNVRV
LAIDQAPKEK EGQNTVVGKT VTLELKPEQA ETLARARQSG SLALALRSIA DVNAADGNKN
ETQMARRGNA IEIIRYGITS SLTAQK
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