Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5679 |
Symbol | |
ID | 5156044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 5926693 |
End bp | 5927622 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640560416 |
Product | putative aspartyl/asparaginyl beta-hydroxylase |
Protein accession | YP_001241538 |
Protein GI | 148256953 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.405521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGAGAC AGCTTTTTGC GCCCCAGCTC GTGGGGCTGT ACATCCTGAT CGGGGCAACC ATCTACGTCC ATTTCCGCGG CAAGCAGCGG CTTCGCTTCG CCCGGCAGCT CGGCGATCAC TCCACCTATC TCGCGCCTTA CAATGTGCTG ATGTATGCCG GCTCGGCCGT GCCGAACACG CCGGTCATTC CGGTCGAGCA GTTTCCGGAG CTCAAGAAGC TGACGGACAA TTGGCAGGAG ATCCGCGAGG AGGCGGTGCG CCTGTTCGAC GAGGGTTTTA TTCGCGCCGC CGCCGCCAAT AATGATTGGG GCTTCTACTC GTTCTTCAAG AGCGGCTGGA AGCGCTTCTA TCTGAAATGG TATGACGACT TCCTGCCCTC GGCGCGCACG CTGTGCCCGA AGACCGTGGA GCTGCTCAAC TCCATTCCGA ATGTGCACGG CGCGATGTTC GCGATGCTGC CGCCCGGCGG CAAGCTCGGC GCCCACCGCG ACCCCTTCGC CGGCTCGCTG CGCTATCACC TCGGCCTGGT GACGCCGAAC TCCGACAAGT GCCGCATCCT GGTCGACGGC GTGCCCTGCG TCTGGCGTGA CGGCGAAGCC TTTATGTTCG ACGAGACCTT CATCCACAGC GCCGAGAACG GCACCGACCA GAACCGCATC ATCCTGTTCT GCGACGTCGA GCGCCCGATG AAATACGGCG TGATGACCGC CATCAACCGC TGGGTCAGCC ACCACATCGT CAAGGCCTCG GCGACGCAGA ACGTCGAGGG CGAGCACGTC GGCGTGCTGA ACAAAGTGTT CGGCAAGCTG TATGAGTTTC ATCTGGCCAC GCGCAAGGTG AAGGCATGGA ACCGAACGGT GTACTACGCG GCGAAGTACA CGCTGACGGT GGCGATCGTC GGCGCGATCG TGGTGTCGGC GTTTCGGTGA
|
Protein sequence | MLRQLFAPQL VGLYILIGAT IYVHFRGKQR LRFARQLGDH STYLAPYNVL MYAGSAVPNT PVIPVEQFPE LKKLTDNWQE IREEAVRLFD EGFIRAAAAN NDWGFYSFFK SGWKRFYLKW YDDFLPSART LCPKTVELLN SIPNVHGAMF AMLPPGGKLG AHRDPFAGSL RYHLGLVTPN SDKCRILVDG VPCVWRDGEA FMFDETFIHS AENGTDQNRI ILFCDVERPM KYGVMTAINR WVSHHIVKAS ATQNVEGEHV GVLNKVFGKL YEFHLATRKV KAWNRTVYYA AKYTLTVAIV GAIVVSAFR
|
| |