Gene BBta_5679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5679 
Symbol 
ID5156044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5926693 
End bp5927622 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content62% 
IMG OID640560416 
Productputative aspartyl/asparaginyl beta-hydroxylase 
Protein accessionYP_001241538 
Protein GI148256953 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.405521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAC AGCTTTTTGC GCCCCAGCTC GTGGGGCTGT ACATCCTGAT CGGGGCAACC 
ATCTACGTCC ATTTCCGCGG CAAGCAGCGG CTTCGCTTCG CCCGGCAGCT CGGCGATCAC
TCCACCTATC TCGCGCCTTA CAATGTGCTG ATGTATGCCG GCTCGGCCGT GCCGAACACG
CCGGTCATTC CGGTCGAGCA GTTTCCGGAG CTCAAGAAGC TGACGGACAA TTGGCAGGAG
ATCCGCGAGG AGGCGGTGCG CCTGTTCGAC GAGGGTTTTA TTCGCGCCGC CGCCGCCAAT
AATGATTGGG GCTTCTACTC GTTCTTCAAG AGCGGCTGGA AGCGCTTCTA TCTGAAATGG
TATGACGACT TCCTGCCCTC GGCGCGCACG CTGTGCCCGA AGACCGTGGA GCTGCTCAAC
TCCATTCCGA ATGTGCACGG CGCGATGTTC GCGATGCTGC CGCCCGGCGG CAAGCTCGGC
GCCCACCGCG ACCCCTTCGC CGGCTCGCTG CGCTATCACC TCGGCCTGGT GACGCCGAAC
TCCGACAAGT GCCGCATCCT GGTCGACGGC GTGCCCTGCG TCTGGCGTGA CGGCGAAGCC
TTTATGTTCG ACGAGACCTT CATCCACAGC GCCGAGAACG GCACCGACCA GAACCGCATC
ATCCTGTTCT GCGACGTCGA GCGCCCGATG AAATACGGCG TGATGACCGC CATCAACCGC
TGGGTCAGCC ACCACATCGT CAAGGCCTCG GCGACGCAGA ACGTCGAGGG CGAGCACGTC
GGCGTGCTGA ACAAAGTGTT CGGCAAGCTG TATGAGTTTC ATCTGGCCAC GCGCAAGGTG
AAGGCATGGA ACCGAACGGT GTACTACGCG GCGAAGTACA CGCTGACGGT GGCGATCGTC
GGCGCGATCG TGGTGTCGGC GTTTCGGTGA
 
Protein sequence
MLRQLFAPQL VGLYILIGAT IYVHFRGKQR LRFARQLGDH STYLAPYNVL MYAGSAVPNT 
PVIPVEQFPE LKKLTDNWQE IREEAVRLFD EGFIRAAAAN NDWGFYSFFK SGWKRFYLKW
YDDFLPSART LCPKTVELLN SIPNVHGAMF AMLPPGGKLG AHRDPFAGSL RYHLGLVTPN
SDKCRILVDG VPCVWRDGEA FMFDETFIHS AENGTDQNRI ILFCDVERPM KYGVMTAINR
WVSHHIVKAS ATQNVEGEHV GVLNKVFGKL YEFHLATRKV KAWNRTVYYA AKYTLTVAIV
GAIVVSAFR