| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5669 |
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| Symbol | rfaD |
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| ID | 5150424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5915498 |
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| End bp | 5916478 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640560407 |
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| Product | ADP-glyceromanno-heptose 6-epimerase precursor |
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| Protein accession | YP_001241529 |
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| Protein GI | 148256944 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.239618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGCTGG TGACCGGCGG CGCCGGCTTT ATCGGATCGA ATCTGGTTGC GGCGCTGAAC
GATGCCGGCC GCACCGACGT CGTCGTGTGC GACACGCTCG GCAGCGAAGG CAAGTGGCGC
AATCTCGCCA AGCGTCAGCT GGCCGATGTG GTGCCGCCCA CCGAGCTCGA CGCCTGGCTG
AAGGGCCGGC GGCTGGATGC GGTCCTGCAC ATGGGCGCGA TCTCCGCCAC CACGGTGACC
GATGGGGACC TGGTGATGGA GCGCAATTTT CGGAGCTCGC TTCGCCTGCT CGACTGGTGC
ACCGCGAGTT CCACCCCGTT CATCTATGCG TCATCGGCCG CGACCTATGG CGATGGTCGC
CAAGGCTTCC AGGACGATCC GTCGCTCGCT GCGCTCAAGG CGCTGCGGCC GATGAATCTC
TACGGCTGGA GCAAGCAGCT GTTCGACACC GCGATCGCTG CGCGTGCCGA ACGGGGCGAG
GCGCTGCCGC CGCAATATGC CGGATTGAAA TTCTTCAACG TGTTCGGTCC CAATGAGTAC
CACAAGGGAT CGATGATGAG CGTGCTCACC CGTCGCTTCG ACGACATCAA GGCCGGACAC
ACGCTACAGC TGTTCAAGTC GCACCGCGAG GGCATCGCCG ACGGCGACCA ACGCCGCGAC
TTCATCTATG TCGACGACGT CGTGCGCGTC ATGATGTGGC TGTTGGCCTC GCCGTCGGTG
TCCGGCCTGT TCAACGTCGG CACGGGCCAA GCCCGCAGCT TCAAGGAGAT GATGCTCGCG
GCCTATGCCA CGCTCGGAGC GACACCCCGG ATCGAGTATA TCGACATGCC CGAAGCGATT
CGCGGCAGCT ACCAATACTT CACCCAGGCC AAGATCGACC GTCTGCTGGC CGCCGGCTAC
AATGGCGGCT TCACGCCGCT CGAGGACGCG GTCGCCCACT ATATCAGGGG CTATCTCGAT
TCCGCCGACC GCTTCCGATA G
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| Protein sequence | MLLVTGGAGF IGSNLVAALN DAGRTDVVVC DTLGSEGKWR NLAKRQLADV VPPTELDAWL
KGRRLDAVLH MGAISATTVT DGDLVMERNF RSSLRLLDWC TASSTPFIYA SSAATYGDGR
QGFQDDPSLA ALKALRPMNL YGWSKQLFDT AIAARAERGE ALPPQYAGLK FFNVFGPNEY
HKGSMMSVLT RRFDDIKAGH TLQLFKSHRE GIADGDQRRD FIYVDDVVRV MMWLLASPSV
SGLFNVGTGQ ARSFKEMMLA AYATLGATPR IEYIDMPEAI RGSYQYFTQA KIDRLLAAGY
NGGFTPLEDA VAHYIRGYLD SADRFR
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