| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5668 |
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| Symbol | rfaE |
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| ID | 5150423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5913984 |
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| End bp | 5915456 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560406 |
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| Product | D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1-kinase |
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| Protein accession | YP_001241528 |
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| Protein GI | 148256943 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.270101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.381321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGACT TTGACGATCT CTCGCAAGCG ATCGCCCGCC AGACGGTGCT GTGCGTCGGA
GACCTCATGC TGGATGAGTT CGTCTATGGC GAGGTGTCGC GGATCTCTCC CGAAGCGCCA
GCGCCGGTGA TTGCCGTTCA GCGCAGCGAG ATCAATATCG GCGGTGCCGG CAACGTCGCA
CGCAACATCG CAGCGCTTGG CGCACGCTGC ATCTTCGTCG GCCTCGTCGG CGATGACGCG
GCGGCGGCCC AACTCGAGGC GGAACTGGCC AGGGAGCCGG GCATCGAGAC CGTGCTGGTG
CGCGATGCGT CGCGGCCGAC GACGCGCAAG GTTCGCTTTG TGTCCGAGCA TTTCTCCGCC
CACATGCTGC GCGCCGATTG GGAGCGCGCC GCGCCGGCGT CCGGCGAGAT CGAGCAGAGG
CTGATCGATG CGATCGTGCC ACGGCTGGCA AGGGCGGATA TCGTGTTGTT GTCCGACTAT
GCCAAGGGCG TGCTGACGGC GCGCGTGCTG CGCAACGTGA TCGATGCCGC GCGCCGGGCC
GGCAAGCGTG TGATCGTCGA TCCCAAGAGT GCGAATCTTG CGATCTACCG CGGAGCGAGT
GTGTTGACGC CGAACCGCAA GGAGTTTTCC GAAGCAACCC GCAGCCGTGC CGAGACGGAG
CAGGAGATCG CTGCGGCGGC GCAGGATGCG ATCTATCTCG CCGATTGCGA GGCCATTCTG
GTGACGCAGA GCGAGCGCGG CATGACCTTG GTGCCGCGCC AGGGCGATGC AATCCACGTC
CCGGCCTATC CGGTGAAGGT GCGCGACGTC TCAGGGGCTG GCGACACTGT GGTTGCCGTC
CTCGCCGCGA CGCTTGCGGC CGGTGCGGGC TGGGAGGAGG CCTTGCGCAT GGCGAGCGCC
GCAGCGGCCG TGGCGGTCAG CAAACAGGGA ACTGCCAGCG TGACATCGGC CGAACTGCGC
CGGAAGATTC TTCCTCACGC CTATCGCGCG GCCGAGGAAA AGATCATCGC GGGCGACGGC
GAAATCCTGG CTCGGGTCGA GGGCTGGCGG AGCGAGGGAC TGCGCGTCGG TTTCACCAAT
GGGTGCTTCG ACATTCTGCA TCCAGGCCAT GTCAAGGTGC TCACGGCTGC CCGCGCCGCC
TGCGACCGGC TGGTGGTCGG GCTGAACAGC GATGCGTCGG TCAAACGGTT GAAGGGCGAG
AGCCGTCCCG TTCAGGACGA GCGTGCCCGC GCCGAGGTGC TGGCTGCGCT CGAGGCGGTG
GATCTCGTCG CCATCTTCAC GGAGGATACG CCGCTTCGCC TGATCGAGCT GGTTCGCCCG
AGCGTGTTGG TGAAGGGCGG TGATTACACG CGTGAGCAGG TGGTCGGACA CGAGGTCGTG
GAGGCGGGCG GCGGTGAGGT GATCCTGATT GACATCCTGA AGGGGCACAG CACGACGGCG
CTGGTCGATC GGGCACGGAG CGACGGCCGA TGA
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| Protein sequence | MFDFDDLSQA IARQTVLCVG DLMLDEFVYG EVSRISPEAP APVIAVQRSE INIGGAGNVA
RNIAALGARC IFVGLVGDDA AAAQLEAELA REPGIETVLV RDASRPTTRK VRFVSEHFSA
HMLRADWERA APASGEIEQR LIDAIVPRLA RADIVLLSDY AKGVLTARVL RNVIDAARRA
GKRVIVDPKS ANLAIYRGAS VLTPNRKEFS EATRSRAETE QEIAAAAQDA IYLADCEAIL
VTQSERGMTL VPRQGDAIHV PAYPVKVRDV SGAGDTVVAV LAATLAAGAG WEEALRMASA
AAAVAVSKQG TASVTSAELR RKILPHAYRA AEEKIIAGDG EILARVEGWR SEGLRVGFTN
GCFDILHPGH VKVLTAARAA CDRLVVGLNS DASVKRLKGE SRPVQDERAR AEVLAALEAV
DLVAIFTEDT PLRLIELVRP SVLVKGGDYT REQVVGHEVV EAGGGEVILI DILKGHSTTA
LVDRARSDGR
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