Gene BBta_5638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5638 
Symbol 
ID5153746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5878801 
End bp5879838 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content68% 
IMG OID640560380 
Productputative alcohol dehydrogenase (Zinc-binding) 
Protein accessionYP_001241502 
Protein GI148256917 
COG category[C] Energy production and conversion 
COG ID[COG1062] Zn-dependent alcohol dehydrogenases, class III 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.743084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCC AAGCTGCCCT CCTGGTCCAG ACCGGCCAGC CGCTCGTCCT GGCCGAGATC 
GAGACGCCGG CCCTGAAGCC GGGGCAGGTC CTGGTCGAGA TCGCTTATTC CGGCGCCTGC
GGCACGCAGG TGATGGAGTG GCGCGGCGAC AAGGGCGAGG ACAAATGGGT GCCGCATTGC
CTGGGCCATG AAGGCACCGG CACGGTGATC GAAGCCGGCA GCGCCGTCAC CAAGGTCAAG
GTCGGCGACA AGGTCGTACT GTCCTGGATC AAGGGCACGG GCATCGAGGC GGGCGGCGCC
GTCTATGACT GGGACGGCAA GAAGGTCAAC GCCGGCGGCG TCACCACCTT CCAGCGCCAT
GCCGTGGTCA GCGAAAACCG CCTGACCCTG CTGCCGCCGG ACCTGCCGAT GGATGTCGCC
GTGCTGCTCG GCTGCGCCGC TCCGACTGGC ATGGGCGCGG TCTACAACGT GCTGAAGGTC
CAGCCCGGCG ATGCGGTCGC CGTGTTCGGC ACCGGCGGCA TCGGTCTGAA CGCGCTGATG
GCCGCCGCAC TCGCCGGCGC CATGCCGGTG ATCGGCATCG ACCCCAACCC GACGCGACGT
GCGCTCGCCC AGATCTACGG CGCGACCCAT GTGATCGACG CCTCCGGCGA CGTGCTGGCC
GAGATCAAGA AGATCGTGCC GCAGGGCGTT GATCTCGCGG TTGAGTCCTC CGGCATTCCG
GCCGTGATGG AGCAGGCCAT CAACGCCACC CGCCAGCAGG GCGGCCGAGC GGTGGTCATC
GGCAATGCCA AGCACGGCGC CGTGCTGTCG CTCAATCCGG GCGTCTTCAA CCAGGGCAAG
AGCCTGCTCG GCACCTGGGG TGGCGACAGC ATGCCGGATC GCGACTACGG GCGCTACGGG
CGGCTCTTGA ACTCCGGCCG TTTCCCGGTG CGGGACCTCC TGTCAAAGCC CTACAGCCTC
GCCCAGGCCG ATCAGGCGCT GCAGGATCTC GCCGCCGGCA AGGTCGGCCG TCCGCTGATC
GACATGTCGC TGCGTTAA
 
Protein sequence
MKTQAALLVQ TGQPLVLAEI ETPALKPGQV LVEIAYSGAC GTQVMEWRGD KGEDKWVPHC 
LGHEGTGTVI EAGSAVTKVK VGDKVVLSWI KGTGIEAGGA VYDWDGKKVN AGGVTTFQRH
AVVSENRLTL LPPDLPMDVA VLLGCAAPTG MGAVYNVLKV QPGDAVAVFG TGGIGLNALM
AAALAGAMPV IGIDPNPTRR ALAQIYGATH VIDASGDVLA EIKKIVPQGV DLAVESSGIP
AVMEQAINAT RQQGGRAVVI GNAKHGAVLS LNPGVFNQGK SLLGTWGGDS MPDRDYGRYG
RLLNSGRFPV RDLLSKPYSL AQADQALQDL AAGKVGRPLI DMSLR