Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5623 |
Symbol | |
ID | 5154580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5858938 |
End bp | 5859900 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640560365 |
Product | hypothetical protein |
Protein accession | YP_001241487 |
Protein GI | 148256902 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein |
TIGRFAM ID | [TIGR00374] conserved hypothetical protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0083696 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.628731 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGCGA TTCTCATTCT CCTCCTCCGG ATCGTGGTGT CGCTCGCCCT GCTCTATCTC GCGCTGCGCG GGATCAACTT CGCGGCGATC GGCGAGCGGC TCAGCCAGAT CAACATCGGC TGGATCGTGC TGGCGGTCGG CATCACGCTG TTCCAGATCT TCATCGGCGC GCTGCGATGG CGGGAGATTT CAGCGCTGTG CGGCGCGCCG CTGACGGATT TGCAGGCATT CCGCTACAAC ATGATCGGGG CATTCTTCAA TCAGACCCTG CCCTCCTCCA TCGGCGGCGA TGCCGTGCGC CTGTGGCTGA TCGGCCGGAC CGGTGCCGGC TGGCGTGCCG CCAGCTACTC GATCCTGACC GATCGCGCAG TCGGCTTCAT CGCCCTGGCC CTCATCATCG TGGCGAGCCT GCCGTGGAGC TATGGCATGA TCGCCGACGA CAAGGGACGG TTGGCCCTGG TGCTGGTCGA TGCGGCCGCG CTGGCTGCCG GCGTCGGCTT TCTCACGATC GGCTATCTGC CAGCCGCGTG GATGAAGGCG TGGTGGCCGA CCCGGCACGT CTATGCCTGC TCGGTGATCG CAAGGAAGGT GATCCTGGGC AGGACGACGG CCGCCAAGAT CGCAGTCCTG TCGCTCTCGA TCCATGTGCT CGCCGTCGTG ATCGCATGGT GCGCCGTGCG CTCGATCGCA GCCCCGGCTG CCTTCGAACA ACTATTCCTG CTGACGCCAC CGATCATGCT CATCACCATG CTGCCGATCT CGATCGCCGG CTGGGGCGTA CGCGAGGCGA CCATGATGGT GGCCTTCGGC TATGCCGGCC TCGCGCCGGC CGACGGCACG GTGGTCTCGA TCCTGTTCGG CGCGGTCTAT TTCATCGTCG GCGGCATGGG CGGCCTGGTG TGGATTCTCA GCGCCGAAAA AGGCGCGGGC AGCCTGACCG TTCCGGCGAC CGTCGAAGAG TAA
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Protein sequence | MRAILILLLR IVVSLALLYL ALRGINFAAI GERLSQINIG WIVLAVGITL FQIFIGALRW REISALCGAP LTDLQAFRYN MIGAFFNQTL PSSIGGDAVR LWLIGRTGAG WRAASYSILT DRAVGFIALA LIIVASLPWS YGMIADDKGR LALVLVDAAA LAAGVGFLTI GYLPAAWMKA WWPTRHVYAC SVIARKVILG RTTAAKIAVL SLSIHVLAVV IAWCAVRSIA APAAFEQLFL LTPPIMLITM LPISIAGWGV REATMMVAFG YAGLAPADGT VVSILFGAVY FIVGGMGGLV WILSAEKGAG SLTVPATVEE
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