| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5619 |
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| Symbol | |
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| ID | 5154898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5852712 |
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| End bp | 5854931 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560361 |
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| Product | SPINDLY family O-linked N-acetylglucosamine transferase |
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| Protein accession | YP_001241483 |
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| Protein GI | 148256898 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.474452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAAGCA CGATCGGATC GCGCGCGTTC CAGAACGCGC GCATGCAGAA GAAGAACCGT
AAGCAGGCCG ACGGCCTGCT GACGCAGGCG GTCGCAGCCT ACCGCGCCGG CCGGCATGCG
GACGCGCAGG CGGTCTGCGG GCAGATCCTG GCCCTTGTGC CGGATCATTT CGACGCCCTG
CATCTCCTCG GCGCTTCGGC GCTCGACAAT GGTCGGCTGG ATCTGGCTGA GCAGGCTCTG
ACCCGGGCCG TCGCCGTCGA GCCGCGCAAT GCCGAGGCCC AGGCGAATCT CGGCCTCGTA
CTCTCCAGCC TGAAACGTTA CGAGGAGGCG CGCGCCGCCC AGGAGCGCGC CATCGCGCTC
AAGCCGAATT TCGCCACCGC GCTGACCGGC CTCGGCAACA CCCTGATGAA CATGCGGCTG
TTCGCGCAGG CGATCGAGGC CCACGACCGC GCCATCGCGC TCAAGCCCGA TTTTGCCGAT
GCCTATTGCA ATCGCGGCAT GGCGCAACTT CTGCTCCTCC GAAACGAGGA AGCCCGCCAG
AGCTTCGAGC GCGCTTTGGC GCTGGCGCCG CGGCATATGC AGGCGACTTT CGGAAAGGGG
CTCGTCAGCG TCAACCTGCG GCATTTCGAT CAGGCGCTCG TGGCGTTCAA CGCGGCGCTT
GCGCTGAAGC CGGGGGCCGC GGCCGTCATC GCCCAGCGAG GGCGCCTCTA CGTCCAGATG
GGGCGGTTCA AGGAGGCCGA AACCGATTTC GACACGGCCC TGACCGCCGA GCCGATGCTG
GAAGCCGCGC TGCTCGGCAA GGCCCATGTG TGCGTGCTCA CCGACCGGAT CGCGCCGGCC
ATGGCGGCGT GCAAACGGGT GCTGGAGCAT AATCCGGCCT CGGAGATCGC GCTGGCCTGG
CTCGGCGCCT GCTTTGCCAG GCAGGGCGAT ACGGCCGCGG CCATTCAGCA TTTCGACCGC
GCGCTGGAGA TCAAGCCGGA TTTCGATGAC GCGATCCTCA AGAAGATCTT CGCGCTCGAT
TTCTATCCCG AGGCCGATGT CGCCATCCAC CAGGCCGCCA GGCGCGAATG GTGGGAGCGT
ATCGGCGCGC CTATTCCGCG ACGTCAGCTC GCGGCTGTCG ACCGCGATGC CGATCGTCGC
GTCACGGTCG GTTACGTGTC GTCGGATTTT CGCAGCCATT CGGCCGCGCT GACCTTCCTG
CCGGTGCTCC GGCATCACGA TCACACAGCC TTCCGGGTCA TCTGCTATTC CTGCTCGCCG
CTGGTGGATT CCGTGACGGA GCAGTGCAAG GCCGCGGCTG ATGGTTGGGT CGATGCTTGG
CAGCTGTCGG ATGATGAGCT CGCCGATCGA ATCCAGGCGG ATCAGGTCGA TATTCTGGTC
GACCTCTCCG GGCATTCGGC CGGCAACCGC CTCGCCGTGT TCGCGCGCAA GCCGGCGCCG
ATCCAGGTCA CGGCCTGGGG GAACGCGACG GGGACCGGTC TGCCGACCAT GGACTACTTC
TTCGCCGATC CGGTCACCGT GCCCCCAGCC GTTCGGCCGC TGTTCGCCGA AGAGGTCTAT
GACCTGCCGG CGCTGATCAC GACCGATCCG CTGCCCGGCG CTGAACCGAC GCCGCTGCCG
ATGCTTCGCA ACGGCCATGT CACCTTCGGC GTCTTCAACC GGATCGACAA GATTTCGGCC
CAGGTCCTCA AGGTCTGGGC AACGCTGCTG CAGGCGCTCC CGTCGGCTCG TGTCGTGATA
AAGAACGGTG CGCTCGACGA CGCCTTCCTG CGTGACGGCC TGATCGCGCG CTTCGTGGCG
CATGGCATCG ACGAGAGCCG GCTGACGTGT CTCGGCTCGT CGATGCGGCA GGAGCACATT
GCGGCCTTTG CCGACATCGA CATGTCGCTG GACCCGTTCC CGCAGAATGG CGGTGTGAGC
ACCTGGGAGT CGCTGCAGGC CGGGGTGCCC GTGGTGGCCA AGCTGGGCAA CAGCTCGGCC
TCCCGCGCCG GCGGCGCGAT CATCAAGGCG ATCGGGCTCG ATGAGTGGGT CGCCGAGGAC
GATGATGGCT ATGTCGCGAT TGCCATCAAA TATGCCGGCC AGCCCGCTGA ACTGGCCAGG
CTGCGTGCCG AGCTGCCGGC GCGGGTCGCG AACTCTCCGG CCGGCGACGT CAAGACCTAC
ACGCGCAAGG TCGAGGAGGG CTACCGTCAG TTCTGGCGTC GGTATTGCGC CGCCGGCTAG
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| Protein sequence | MQSTIGSRAF QNARMQKKNR KQADGLLTQA VAAYRAGRHA DAQAVCGQIL ALVPDHFDAL
HLLGASALDN GRLDLAEQAL TRAVAVEPRN AEAQANLGLV LSSLKRYEEA RAAQERAIAL
KPNFATALTG LGNTLMNMRL FAQAIEAHDR AIALKPDFAD AYCNRGMAQL LLLRNEEARQ
SFERALALAP RHMQATFGKG LVSVNLRHFD QALVAFNAAL ALKPGAAAVI AQRGRLYVQM
GRFKEAETDF DTALTAEPML EAALLGKAHV CVLTDRIAPA MAACKRVLEH NPASEIALAW
LGACFARQGD TAAAIQHFDR ALEIKPDFDD AILKKIFALD FYPEADVAIH QAARREWWER
IGAPIPRRQL AAVDRDADRR VTVGYVSSDF RSHSAALTFL PVLRHHDHTA FRVICYSCSP
LVDSVTEQCK AAADGWVDAW QLSDDELADR IQADQVDILV DLSGHSAGNR LAVFARKPAP
IQVTAWGNAT GTGLPTMDYF FADPVTVPPA VRPLFAEEVY DLPALITTDP LPGAEPTPLP
MLRNGHVTFG VFNRIDKISA QVLKVWATLL QALPSARVVI KNGALDDAFL RDGLIARFVA
HGIDESRLTC LGSSMRQEHI AAFADIDMSL DPFPQNGGVS TWESLQAGVP VVAKLGNSSA
SRAGGAIIKA IGLDEWVAED DDGYVAIAIK YAGQPAELAR LRAELPARVA NSPAGDVKTY
TRKVEEGYRQ FWRRYCAAG
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