| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5618 |
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| Symbol | |
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| ID | 5154897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5850411 |
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| End bp | 5852630 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640560360 |
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| Product | SPINDLY family O-linked N-acetylglucosamine transferase |
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| Protein accession | YP_001241482 |
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| Protein GI | 148256897 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.645263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAAGCG ACGTCGGTTC ACGCGCGTTC CAGAATGCGA GGCTGCAGAA GAAGCACCGC
AAGCAGGCCG ATGCGCTCAT GCCGCAGGCT GTCGCCGCCT ATCGCAGCGG TCGCCGCGCC
GAGGCCCAGG CGATCTGCGG ACAAATTCTC GCATTGCTTC CTGATCATGT CGATGCGCTG
CATCTCCTCG GCGTCACGGC TCTCGATGGC GGCCAACTGG ATCTGGCCGA GCAGGCGCTG
GCGAAGGCGG TGGAGGTCGA TCCGCGTCAC GCCGAGGCGC TGTCCAATCT CGGCCTCGCC
CTGTTCAGCC GCAAGCGCTT CGAGGAGGCG CGGAAGTGCC AGGAGCGGGC GGTCACGCTG
AAACCCAACC TTGTGGTCGC GCAGACCGGC CTCGGCAATA CGCTGATGCG CCTCGGCCGT
CCCGATGAAG CCGTCGCGGC GCACGACCGC GCGATTGCGC TGAAGCCGGA CTACGCGGAC
GCCTATTGCA ATCGCGGCAT GGCGCTGCTC ACCCTCAACC GCAATGCCGA GGCCAATCAG
AGCTTCGACC GCGCGCTGTC GCTCAATCCG CGCCATATGG AGGCGATGTT CGGCAAGGGC
CTCGCCAGCG TCAATCTGCG CCACTTTGCC GACGCGCTCG CGGCGTTCGA TGCCGCCCTG
GCCTTGAAGC CCAATGCCGC GCAGGTGCTG GCGCAGCGCG GCCGGCTGCA TCAGACCGCC
GGACGTTTCG ACCAGGCGCG GGCGGATTTC GCGGCTGCGC TGGCCCATGA TCCGATGCTG
GAAATGGCGC TGCTCGGCTC GGCGCAGCTC GGCCATTTCA GCAATGTCGC GCAGTCGATC
GATGCCTGCC GCAGGGTGCT GGAGCAGAAC CCGTTGTCCG AGGATGCCTG GCTGTGGCTC
GGCGTCTGCT GCGGCAAGCA GGGCGAGGTC GCTGCCGCCG TCGCGCATTT CGATCGCGCG
CTCGAGATCC GGCCCGATTT CGCCGAGGCG ATGACCGCAA AGATCTTCAC GCTCGAATTC
ATGCCCGATG CCGATTTCGA ACTGCATCAG GCCGTCAGGC GCGAGTGGTG GCAGCGGATC
GGCAGCCGCA TCCCGCGGCG GGCCTTGCCG CCGCGCGACC TCGATCCGGA GCGGCGTCTC
ACCATCGGCT ATGTCTCGTC GGATTTCCGC AATCATTCCG CGGCGCTGAC CTTCCTGCCG
GTGCTGAAGC ATGCCAACCG CCAGGATGTC CGGATCTGCT GCTACGCCTG CTCGCCGGTG
CAGGACGCGG TGACGGCGCA GTTCCGCGCC TGCGCCGATG TCTGGGTGGA TGCCTCGCAG
ATGTCCGACG ACGAGCTCGC CGATCGAATC GAGGCGGATG CGGTCGATAT CCTCGTCGAT
CTCTCCGGCC ATTCCGCGGG CAACCGACTG CCGTTGTTTG CGCGCAAGCC CGCTCCGGTT
CAGGTCTCCG CCTGGGGCAG CGGCACCGGC ACCGGCCTGC CGACGATCGA CTATTTCTTC
GCCGATCCGG TCACGGTGCC GATGGCTGCG CGGCCCTTGT TCGCGGAGCA GGTCCACGAC
CTGCCTGCCG TGATCACCAC CGAGGCGCTG CCTTGCATCG CGCCGACGCC GCTGCCGATG
CTGCAGAACG GGCATGTGAC CTTCGGCGTC TTCAATCGCC TGGACAAGAT CTCCGATCCG
GTGCTCCTGG TCTGGACCCG CCTGATGCGG CAGCTGCCGG ACTCCCGGAT CGTGATCAAG
AGCGGTTCGC TCGACGATCC GCTGTTGCGC GATCGGTTGC TGGCGCGCTT CGCCGCTCAA
GGCGTCAGCC AGGACCGCAT CACCTGTCTC GGCTGGTCGA CGCGCGAGCT GCAGATCGCG
CAATTCGCCC AGGTCGACAT TTCGCTCGAT CCGTTCCCGC AGAACGGCGG CGTCAGCACC
TGGGAATCCT TGCAGGCCGG CGTGCCGGTG ATCGCCTTGC TCGGGCGCAG CGCCGCCTCG
CGCGCCGCCG CAGCGATCGT CACGGCGGTC GGGCTTGAGG ACTGGGTTGC GGAGGACGAC
GACGGCTACA TCGCGATGGC CATCAAGCAT GCGAGCCGGC CCGATGTGCT GGCGAGGCTG
CGTGCCGAGC TGCCGGGGAT GGTTGCCAAT TCGGCGGCCG GCAATGTCGA GACCTATGCG
CGCAAGGTCG AAGAGGGCTA TCGCCTGTTC TGGCGCCGGT TCTGCGTGGC CGCAGGATGA
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| Protein sequence | MASDVGSRAF QNARLQKKHR KQADALMPQA VAAYRSGRRA EAQAICGQIL ALLPDHVDAL
HLLGVTALDG GQLDLAEQAL AKAVEVDPRH AEALSNLGLA LFSRKRFEEA RKCQERAVTL
KPNLVVAQTG LGNTLMRLGR PDEAVAAHDR AIALKPDYAD AYCNRGMALL TLNRNAEANQ
SFDRALSLNP RHMEAMFGKG LASVNLRHFA DALAAFDAAL ALKPNAAQVL AQRGRLHQTA
GRFDQARADF AAALAHDPML EMALLGSAQL GHFSNVAQSI DACRRVLEQN PLSEDAWLWL
GVCCGKQGEV AAAVAHFDRA LEIRPDFAEA MTAKIFTLEF MPDADFELHQ AVRREWWQRI
GSRIPRRALP PRDLDPERRL TIGYVSSDFR NHSAALTFLP VLKHANRQDV RICCYACSPV
QDAVTAQFRA CADVWVDASQ MSDDELADRI EADAVDILVD LSGHSAGNRL PLFARKPAPV
QVSAWGSGTG TGLPTIDYFF ADPVTVPMAA RPLFAEQVHD LPAVITTEAL PCIAPTPLPM
LQNGHVTFGV FNRLDKISDP VLLVWTRLMR QLPDSRIVIK SGSLDDPLLR DRLLARFAAQ
GVSQDRITCL GWSTRELQIA QFAQVDISLD PFPQNGGVST WESLQAGVPV IALLGRSAAS
RAAAAIVTAV GLEDWVAEDD DGYIAMAIKH ASRPDVLARL RAELPGMVAN SAAGNVETYA
RKVEEGYRLF WRRFCVAAG
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