| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5603 |
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| Symbol | |
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| ID | 5155422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5828062 |
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| End bp | 5830563 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640560346 |
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| Product | periplasmic sensor diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001241468 |
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| Protein GI | 148256883 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.748206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.248656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGGTTG AAGAGTACAG TGCATCAACC CTGACTGAGA GGAGCGAGAC TCGCGTCGGC
AGCGGCCGCG AGAAGTTGCT TTCGTCCTTA TCACGCTACC GCCTCTATCG TCCTGCGGTC
ATCGCCGCAT GTGTCGGCGT GGTGCTGTCG GTGGTCGAAA CGGTCGCGGT CGGACGCTGG
GAGAACCGGC TCGCGCGCGC CGATTTCGAA GCCGTGGCCG AAGCCCAGGC GATCCTGGTT
CAGAACGGCG TCAATGAGTA TGTCAGCCGG CTGACCGCGC TGCGCACGCG GTTCGAGTCG
GCCAATGACG ACATCACGCG TAGCGAGTAT CAGACCTTCA GCGCGCGGCT GTTCGAGGCG
CATCGCGGCA TGCTGCGCCT GGCATGGCTG CCGCGGATCA AGCGCAAGGA ACGCGGCGAA
TACGAAGCGG CGGCGATCAC CGACGGCGTT CCGGCCTTCC GCATCAAATC CTTCCCCGAT
GGCACGGTCG CACCGGAGAG CGACGAATAT TATCCGGTCT ACTTTTCGAC CGAGGCGAAG
ACCTCCCCGG TCTATGGTCT GGACTATTGG AGCATCCCGG ACCACCGGGC CGTGCTCGAG
CAGTCGCGTG ACTACGACAT GATCGGCGCG TTGCGGACGC GGCAAAATCT CATCAATCAG
AACGAACGTC CCAACGCCGT GATGATCGGT ATCCCGGTCT ACGCCAAGGG CACCTCGCGC
ACCACGGTCG CCGATCGACG CCGCAACCTC ACCGGTTTCA TTATCGGCGT GTTCGATCTG
CCGATGCTGC TGCAAGCCGT GCGGACCAAC AATCCCAACA GCTCGGCGCT GGCGATCAAC
CTGCTTCCGC CCGAGCGGGT CATCAACGCC TCCGGCGTGG ACCCGCAGCG CTGGCCGGCT
GATCCCAATA TCTGGTCGAC GACTTTGCGG ATCGGCGATG CCGATTGGGT GTTTCAGGCC
GCACCTGCCG GCGGCGCGCT GATGACCACG CATAATCGGG CGCTTGCCTT CTATGCCGCG
GGCATCGCGA CAACGCTCTT CTTCGCCGTC TATCTTGTGC TCTCCAGCCG TAACGCGCGG
CAGCTGGCAC TCGCCAATCG CCGCGTGCTC GAACTGGCGC AGACCGATGC GCTGACGGGG
CTTGCGAACC GCGCCTTCTT CCTGGAGGAG ATGGAGCGCA TCAACGACGA GAAGGGCGGC
CGCTTCACCG TCTTCCTGCT CGACCTCGAT CGCTTCAAGA ACGTCAACGA CTCGCTCGGG
CATGGGGCGG GAGACGAACT GCTGGTGCAG GTCGCCCAGC GCCTGAGATC GCAGCTGCGT
GAGGAGGATG TGCTGGCCCG GCTCGGGGGC GACGAATTCG CGTTGATCCA GGCCGGGTTC
TCGGATCAGC GAGCGTCCGC GACCGAACTG GCGCAGCGGA TCACGCGGCT GATCGCCGAA
CCGTTCCAGA TCAGCGGCCA GCGCGTCGAG ATCGGCACCA GCATCGGCAT CTCGCTCGCG
CCGCAGCACG GCCGCGACCA GGAGCATCTG CTCAAGAAAG CCGATCTTGC GCTGTATCGC
TCGAAATCCG CGGGGCGCAG CTGCTATACG ATGTATGACG ACGTCATGTC GGCGGAGCTC
GAGGCGCGCA ACACGCTCGA GGGCGATCTG CGTGACGCCA TCGCGCAGTG TCAGTTCGAG
GTTCACTACC AGCCCTTCTA CGACGCCGAG ACGCGCCAGC GCCGCGGCGT CGAGGCGCTG
GTGCGCTGGC GCCACCCGGT CAAGGGGCTG GTGCCGCCCG ACAAGTTCAT TCCGCTGGCG
GAAGCCACCG GCCTGATCGT GCCGCTCGGC GAATGGATCA TCGGCCGGGC CTGTGACGAC
GCGACGTCAT GGCCCGACGA CATCAAGGTG GCGGTCAATC TGTCGCCCGT TCAGTTCAAG
CAGGCGGAAC TGTTCGACGT CATTCAATCG GCGCTGGCGC GCTCCGGGCT CGATCCGAAG
CGGCTGGAGA TCGAGATCAC CGAGTCGGTG CTGCTAGAGC GGGCGGCCGA GAACGAGAGC
TTCATCGACA AGCTCAAGGG GATCGGCATT TCGCTGGCGC TCGACGATTT CGGCACCGGC
TATTCGTCGC TGCGCTCGCT GACTGCATTC CCGTTCAACA AGATCAAGAT CGACAAATCC
TTCATCGCCA ATCTGAGCGT GCGCGAAGAA AGCGCGGCCG TGATCTCCTC CGTGGTGACG
CTGGCGCGCG GGCTCGGAAT TCAGATCACG GCTGAAGGCG TCGAGACCGA GGAGCAGCTT
CGGCACCTCT GCACGCTGGG GGTCAACTTC GCGCAAGGCT ATCTGCTGGG GCGGCCAATG
CCTGTGGAGC AGCTCGAGCA GCATCTGGAG ATCACGCGCG CCGCGCCCGA AACCGACGAG
CTGATCGGTG AAGCGTCGGA GGAGGCGGAT CCGCGCTCTG CCGAAGTCGT CGCGCTCATT
CCCCGGTCCG GGGCGCCGCT ATCCTTCGCA TCCAACGGCT GA
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| Protein sequence | MQVEEYSAST LTERSETRVG SGREKLLSSL SRYRLYRPAV IAACVGVVLS VVETVAVGRW
ENRLARADFE AVAEAQAILV QNGVNEYVSR LTALRTRFES ANDDITRSEY QTFSARLFEA
HRGMLRLAWL PRIKRKERGE YEAAAITDGV PAFRIKSFPD GTVAPESDEY YPVYFSTEAK
TSPVYGLDYW SIPDHRAVLE QSRDYDMIGA LRTRQNLINQ NERPNAVMIG IPVYAKGTSR
TTVADRRRNL TGFIIGVFDL PMLLQAVRTN NPNSSALAIN LLPPERVINA SGVDPQRWPA
DPNIWSTTLR IGDADWVFQA APAGGALMTT HNRALAFYAA GIATTLFFAV YLVLSSRNAR
QLALANRRVL ELAQTDALTG LANRAFFLEE MERINDEKGG RFTVFLLDLD RFKNVNDSLG
HGAGDELLVQ VAQRLRSQLR EEDVLARLGG DEFALIQAGF SDQRASATEL AQRITRLIAE
PFQISGQRVE IGTSIGISLA PQHGRDQEHL LKKADLALYR SKSAGRSCYT MYDDVMSAEL
EARNTLEGDL RDAIAQCQFE VHYQPFYDAE TRQRRGVEAL VRWRHPVKGL VPPDKFIPLA
EATGLIVPLG EWIIGRACDD ATSWPDDIKV AVNLSPVQFK QAELFDVIQS ALARSGLDPK
RLEIEITESV LLERAAENES FIDKLKGIGI SLALDDFGTG YSSLRSLTAF PFNKIKIDKS
FIANLSVREE SAAVISSVVT LARGLGIQIT AEGVETEEQL RHLCTLGVNF AQGYLLGRPM
PVEQLEQHLE ITRAAPETDE LIGEASEEAD PRSAEVVALI PRSGAPLSFA SNG
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