Gene BBta_5597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5597 
Symbol 
ID5153890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5822887 
End bp5823711 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID640560340 
Productnon-heme haloperoxidase 
Protein accessionYP_001241462 
Protein GI148256877 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.373975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.235263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTTC TGAAAACCAA TGACGGCACG GAGATTTACT ACAAGGATTG GGGCTCCGGT 
CAGCCGATCG TGTTCAGCCA TGGCTGGCCG CTGTCATCGG ACGATTGGGA TGCGCAGATG
CTGTTCTTCC TCAATCACGG TTTTCGCGTC ATCGCCCATG ACCGCCGCGG CCATGGCCGC
TCCAGCCAGG TGTCCGACGG CCATGACATG GACCATTATG CCGACGATCT CGCGGCGCTC
ACGGCGCATC TCGATCTGAA GGGCGCGGTT CACGTCGGTC ACTCGACCGG CGGCGGCGAG
GTCGTGCACT ATCTCGCGCG TCATGGCGAG AGCAGGGCGG CCAAGGCCGC GATCATCGCC
GCGGTGCCGC CTCTGATGGT GCAGACAGCC GCCAATCCGG GCGGCCTGCC GAAATCGGTG
TTCGATGACT TCCAGGCCCA GGTCGCCACC CGCCGCGCGG AATTCTATCG CGATGTCGCG
GCCGGCCCGT TCTACGGCTA CAACAAGCCC GGCGCCAAGC CGTCGGAAGC CGTGATCCAG
AACTGGTGGC GGCAGGGCAT GATGGGCAGC GCGAAAGCGC ATTATGACGG CGTCGTCGCC
TTCTCGCAGA CCGACTTCAC CGAGGATCTG AAGAAGATCT CGTTGCCGGT GCTGGTCATG
CACAGCGAGG ACGATCAGAT CGTGCCTTAC GCCGATTCCG CGCCGCTGTC GGCCAAGCTG
CTCAAGAACG GCACCTTGAA GACCTACAAG GGTTTTCCGC ACGGCATGCC GACCACGGAA
GCCGCGACCA TCAACGCCGA CCTGCTGGCC TTCATCAAGG GCTGA
 
Protein sequence
MPVLKTNDGT EIYYKDWGSG QPIVFSHGWP LSSDDWDAQM LFFLNHGFRV IAHDRRGHGR 
SSQVSDGHDM DHYADDLAAL TAHLDLKGAV HVGHSTGGGE VVHYLARHGE SRAAKAAIIA
AVPPLMVQTA ANPGGLPKSV FDDFQAQVAT RRAEFYRDVA AGPFYGYNKP GAKPSEAVIQ
NWWRQGMMGS AKAHYDGVVA FSQTDFTEDL KKISLPVLVM HSEDDQIVPY ADSAPLSAKL
LKNGTLKTYK GFPHGMPTTE AATINADLLA FIKG