| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5588 |
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| Symbol | |
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| ID | 5153977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5813533 |
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| End bp | 5815110 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640560331 |
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| Product | putative multidrug resistance protein, emrB-like protein |
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| Protein accession | YP_001241453 |
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| Protein GI | 148256868 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.339055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.392852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGG CTGCTGCCCT GTCTCAGCCG CGATCCGCCA CCAATCCGTG GCTGATCGCG
GTGCTCGTCG CGCTGGCGAC CTTCATGGAG GTGCTCGACA CGACCATCGC CAATGTCGCG
CTGCCCTACA TCGCCGGTGG CATGGGTGTG AGCCAGGACG AATCCTCCTG GGTGGTGACG
ACCTATCTCG TCTCGAATGC CATCAGCCTC ACGGCATCCA GCTATCTGGC GAAACGCTTC
GGCCGGAAGT CCTTTTTCCT GATCTGCCTC GGCCTGTTCA CGACGAGTTC GGTGCTGTGC
GGCTTCGCCT GGAATCTGAA CACGCTGCTG GTCTTCCGCA TCCTGCAGGG CCTCGGCGGT
GGCGGCATGG TGCCCGTTGC GCAATCGATC CTCGCGAGCT CGTTCCCGCC AGCCAAGCGT
GGCCAAGCCT TTGCACTGTT CGGAGTCGCC GTCGTCGTGG CGCCGGTGGT CGGTCCGACC
CTTGGCGGCT ATCTCTCCGA CAACGCGTCC TGGCACTGGT GCTTCCTGAT CAACGGTCCG
GTCGGCGTCG CCGCGATGCT GCTGATCGGA TTGATCCTGC AGGAGCCCGC AAGTGAGCCT
GGCAAGCAGC AGAATGAGGG GTTCGATGTC ATCGGCTTCG TGCTGGTGGC GACCTTCCTC
GGCGCGCTGG AACTGATGCT CGATCGCGGC CTGGAGGACG ACTGGTTCGA TTCGCGCTTC
ATCATCGCCA CAGCGGCGGT CTGCGCCGCT GCCTTCGTTG CGATGATCCC GTGGGAGATG
AATCACAAGA ATCCCACGGT GGACGTGCGC ATGCTGGCGT CGCGCCAGTT CGGCGCGAGC
TTCCTGGTGA TGCTGGCGAC CGGCGCCATC CTGCTCGGTA CCACCCAGAT GCTGCCGCAG
ATGGTGCAGC AGGATTTCGG CTATACCGCG ACCTGGGCCG GTCTCGTGCT GTCGCCGGGC
GGCCTCGTCA CCATGGTGAT GATGTTCGTC GTCGGGCGCC TGTCGGGCAA GGTGCAGCCG
AAATACATGA TCATGGCCGG CGCCACGATT GTCGCGCTGG CCATGTATGA TCTCACTCGC
GTCTATGCCG ATGTCGGTTT CTGGTTCTTC GCCGATTCGC GCATGCTGGT CGGAATCGGG
CTGCCGCTGA TCTTTCTCTC GATCACCACG GCGTCCTACA ATGGCATCCC GCCCGAGAAG
ACCGACCAGG CGTCGGCGCT GATCAATGCC GCGCGCAACA CCGGCGGCTC GATCGGCGTC
TCGCTCGCCG CCAACATCCT GTCGCATCGG GCCCAATTCC ACCAGAACCG GCTAGTGGAG
ACCGTGATTC CGTCGAACCC GGCCTATCAG GACACTCTGC ATCAGATGAC GAACTACTTC
ACCGCCCATG GCAGCTCGCT CGTCCAGGCG CAGCAGCAGG CGATCGCATG GATCGGCCAG
ACCGTACAGA TGCAGTCGTC GCTGCTCGCT TATGTCGACG TCTACTGGGC CTTGATGCTG
ATTTCGCTGT CGGCGATTCC GCTGGCGCTC ACCTTGCGCA AGGTCAAGCT CGGCGGCGGC
CCGGCCATGG CACATTGA
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| Protein sequence | MSGAAALSQP RSATNPWLIA VLVALATFME VLDTTIANVA LPYIAGGMGV SQDESSWVVT
TYLVSNAISL TASSYLAKRF GRKSFFLICL GLFTTSSVLC GFAWNLNTLL VFRILQGLGG
GGMVPVAQSI LASSFPPAKR GQAFALFGVA VVVAPVVGPT LGGYLSDNAS WHWCFLINGP
VGVAAMLLIG LILQEPASEP GKQQNEGFDV IGFVLVATFL GALELMLDRG LEDDWFDSRF
IIATAAVCAA AFVAMIPWEM NHKNPTVDVR MLASRQFGAS FLVMLATGAI LLGTTQMLPQ
MVQQDFGYTA TWAGLVLSPG GLVTMVMMFV VGRLSGKVQP KYMIMAGATI VALAMYDLTR
VYADVGFWFF ADSRMLVGIG LPLIFLSITT ASYNGIPPEK TDQASALINA ARNTGGSIGV
SLAANILSHR AQFHQNRLVE TVIPSNPAYQ DTLHQMTNYF TAHGSSLVQA QQQAIAWIGQ
TVQMQSSLLA YVDVYWALML ISLSAIPLAL TLRKVKLGGG PAMAH
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