| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5584 |
|---|
| Symbol | |
|---|
| ID | 5154072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5808676 |
|---|
| End bp | 5809569 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640560327 |
|---|
| Product | putative metapyrocatechase (MPC) (CatO2ase) (catechol 2,3- dioxygenase) |
|---|
| Protein accession | YP_001241449 |
|---|
| Protein GI | 148256864 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2514] Predicted ring-cleavage extradiol dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.932647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.332055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGGT TTCCGGTCAC GGCTCTGCGC AGCGTCGATC TCGGCACGCC CGATCTCGCA
CGCTCGGAAG CGTTCTATCG GGAGGTCTGG GGGCTGGAGC GCGTCGGGAC GGCAGGTGGC
GTCGTCTATC TACGCGCAAC GGGACGCGAT CATCACGTCG TCGCGCTGCA TCGGAGCGCG
CGCACCGAGC TGAGAGCGGT GACCTTCCGC GTTGCCGACG CCGATGACTT CGAGGCGATC
TCTCGCAATG CCATTGAACA AGGCGCGACG CTGATCGCCG CGCCGGCGGC GAATATGGCG
CCCGACGGCG GGACGATCAT GACGCTCCGC AGCCCCGAGG GCGGCCTGCT GCGCTTTGTC
CATGGCGATA TCAGGCACGA TGCCAGGCCG TCACGGCCTG AGCTCCCCGA GCGGCTGGCC
CACGTCAATC TCAACAGCAC CGATGTCGAT CGCACCGCCG CATTCTACGC GCGGGCGCTC
GGCTTCAAGC TGACCGACCG CTCGGCGGCG ATGGCGTTCG TTCGCTGCAA TTCCGACCAC
CATGCTGTCG TGATCGCCGC GGCCAAGGTC AATGGACTCA ACCACGTCGC CTTCCTGATG
CCGACCTGGG AGGGCGTGAT GCGCGGATCG GGCCGCATGA TCGATGCCGG CTATCCGATC
GCCTGGGGCG TCGGCCGCCA TGGCCCGGGC GACAATGTGT TTGCCTATTT CATCGATCCC
GTCGGCACCG TCATCGAATA CACCGCCGAG GTGCTGCAGG TCGACGACGA CTATGTCGTG
CGCGGGCCCG AGCATTGGGT CTGGCCGCCC GGCCGCACCG ATCAATGGGG CATCGCGCCG
CCCAAGGCCG AACACGTCAA GGCCGCGCAG CTCGCGGTCG GCTTCGCCGC CTGA
|
|---|
| Protein sequence | MTRFPVTALR SVDLGTPDLA RSEAFYREVW GLERVGTAGG VVYLRATGRD HHVVALHRSA
RTELRAVTFR VADADDFEAI SRNAIEQGAT LIAAPAANMA PDGGTIMTLR SPEGGLLRFV
HGDIRHDARP SRPELPERLA HVNLNSTDVD RTAAFYARAL GFKLTDRSAA MAFVRCNSDH
HAVVIAAAKV NGLNHVAFLM PTWEGVMRGS GRMIDAGYPI AWGVGRHGPG DNVFAYFIDP
VGTVIEYTAE VLQVDDDYVV RGPEHWVWPP GRTDQWGIAP PKAEHVKAAQ LAVGFAA
|
|---|
| |