Gene BBta_5577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5577 
Symbol 
ID5153922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5802972 
End bp5803499 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content67% 
IMG OID640560320 
Productprotein tyrosine phosphatase 
Protein accessionYP_001241442 
Protein GI148256857 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.163475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGATC GCATCTACAA TGTGCTGTTT CTCTGCACCG GAAACTCGGC GCGCTCGATT 
CTGGCGGAAT CGATCCTGCG CAAGCAGGGC GCCGGCCGCT TCCGCGCGTT TTCGGCCGGC
AGTACGCCGA AGGGCGCTGT GCATCCACTG GCGATCGAGC TGCTCGCGCG CATGGATTAT
CCGACCGATG ATCTGCGTTC CAAAAGCTGG AGCGAGTTCG CCGTCGCGGG CGCGCCGGTG
ATGGACTTCG TCTTCACCGT CTGCGACGCC GCGGCCGGCG AGGCCTGCCC GATCTGGCCG
GGGCAGCCGA TGACGGCGCA TTGGGGCATC GAGGATCCGG CGGCGGCCGA AGGTACGGAG
CTGGAGCGGC TCGCCGCGTT CACCACCGCC TTCCGCTATC TGAACAACCG CATCGGCGCC
TTCATCCAGC TGCGGCTCGA TCGCATCGAC AGGCTGTCGC TGGGGACGCG GCTGCGCGAG
ATCGGAACCC GTGAGGGGGC TACATCCTCG CGCTCCGACG TCGCGTGA
 
Protein sequence
MPDRIYNVLF LCTGNSARSI LAESILRKQG AGRFRAFSAG STPKGAVHPL AIELLARMDY 
PTDDLRSKSW SEFAVAGAPV MDFVFTVCDA AAGEACPIWP GQPMTAHWGI EDPAAAEGTE
LERLAAFTTA FRYLNNRIGA FIQLRLDRID RLSLGTRLRE IGTREGATSS RSDVA