| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5568 |
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| Symbol | glgX |
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| ID | 5153298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 5794737 |
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| End bp | 5796974 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640560311 |
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| Product | glycosyl hydrolase (glycogen debranching enzyme) |
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| Protein accession | YP_001241433 |
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| Protein GI | 148256848 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCAGC GCACCGATCG GGGTGACGCG TTGACGCGGG CAGCACTCAA CCTCCGCAAG
GCCAAGATCA GCGAAGGGCG GCCGTTTCCG CTGGGCGCCA CTTGGGACGG TCTCGGCGTC
AACTTTGCGA TCTTTTCCGC GCACGCGACC AAGGTCGAGC TCTGTCTGTT CGATGAGACC
GGCGACACGG AGCTCGAGCG CATCGAGCTG CCCGAATACA CCGACGAGGT CTGGCACGGC
TATCTGCCGA CGGCGCGCCC GGGGACGGTC TATGGCTATC GCGTGCATGG ACCTTATGAG
CCGGATGCCG GCCACCGCTT CAATCCCAAC AAGCTGGTGA TCGATCCCTA TGCCAAGCAG
CTGATCGGCA ATCTGCGCTG GGGTCCCGAG CTGTTCGGCT ACCAGCTCGA CCATGCCGAC
AAGGATCTCT CCTTCGATGA TCGCGACAGC GCGCCCCTGA TGCTGAAATG CCGGGTGATC
GATCCGGCCT TCACTTGGGG CACCTCGCGC AAGCCGGAGA TTCCGTGGGA GCGGACCATC
TTCTATGAGA TGCACGTCAA GGGCTTTACC AAGCTGCATC CGCTGGTGCC GGAGGCCGAC
CGCGGCACCT TCGCCGGCCT CGCGCATCAT GACATTCCAG CCTATTTGCG CTCGCTCGGC
ATCACCTCGG CCGAGCTGCT GCCGATCCAT GCCTTCATCG ACGACAGCTA TCTGATCGAG
AAGGGGCTGC GCAATTATTG GGGCTATAAT TCGATCGGTT TCTTCGCGCC GGAACCGCGC
TATTTGAAGA CGCCGCTCGC GACCGAATTC AAGACCATGG TCAACCAGTT CCACGCCAAC
GGCATCGAGG TCATTCTCGA CGTGGTCTAT AACCACACCG CCGAAGGCAA CGAGCTCGGT
CCGACCTTGT CTTTCAAGGG CATCGACAAC GCCAGCTACT ACCGGCTGAT GCCGGAGCAG
AAGCGCTACT ACATCAACGA CACCGGCACC GGCAACACGG TGAACCTGTC GCACCAGCGC
GTGCTGCAGC TGGTGGCGGA TTCGCTGCGC TATTGGGCGA CGGAGATGCG GGTCGACGGT
TTCCGCTTCG ACCTCGCTAC CATCCTGGCA CGCGAGCCCT ATGGCTTCGA CGAGGGCGGC
AGCTTCCTGG ACGCCTGCCG TCAGGACCCG GTGCTGTCGA GTGTCAAGCT GATCGCCGAG
CCCTGGGACA TCGGTCCCGG CGGCTACCAG GTGGGGCAGT TTCCGCCGGG CTGGGCAGAG
TGGAACGACA AGTTTCGCGA CACTGCGCGG GCGTTCTGGA AGGGGGACGG CGGCACGCTC
GCCGATTTCG CGAAGCGCAT CTCCGGCTCG GGCGACCTCT TCAACAAGCG CGGCCGTCGG
CCCTGGGCGA GCGTGAACTT CATCACCGCC CATGACGGCT TCAATCTCAA CGACCTCGTC
TCCTACAACG ACAAGCACAA TGAGGCGAAC GGCGAGGACA ATCGCGACGG CCACAGCAAC
AACCATTCCT GGAACTGCGG CGTCGAGGGA CCGACGGACG ATCCCCAGAT CATCGGCTTG
CGCGAGCGGC AGAAGCGCAA CCTGCTCGCC ACGATGCTGC TGTCGCACGG TACGCCGATG
CTGCTCGCCG GCGACGAGTT CGGCCACTCG CAGGGCGGCA GCAACAACGC CTATGCGCAG
GACAACGAGA CCACCTGGCT CGACTGGATG GGTATTGCGC CGCAGGGGCG GGCTCTGCGC
GAGTTCACAC GCAAGCTGAT CGCGATGCGC AAGGCGTTTC CGATTCTCTA CCGCAGCCGT
TTCCTGGTCG GCTCGCACAA TGAGGACCTC GGCGTCAAGG ACGTGACCTG GCTCGCTCCC
TCAGGCGAGG AGATGACGAC CGAGCAGTGG ACCGACGACA ACGCGCGCTG CTTCGGCATG
CTGCTCGACG GCCGCGCCCA GGAGACCGGT GTCAAGCGCC GCGGCTCGGA CGCGACGCTG
CTTTTGATCT ACAATGCGCA TTTCGACGTG GTGAACTTCA CGCTGCCCGC GGTGCCCGAA
GGACACAATT GGCTGGCGCT GATCGACACC AACCAGCCTG ATGCGCAGCT CCAGTCGTTT
TCCTTCGGCC ATGTCTATGC GGTCACGGGA CGGTCGATGC TGGCGCTCGG CCTGTCGTCC
GAGCAGCAGC CGATGCGCAG TCTGCGCCAC GGCCTCGGTG CCCTGCTCGA CATCGCGGAG
GCGCCGCTGC CGGGGTAG
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| Protein sequence | MDQRTDRGDA LTRAALNLRK AKISEGRPFP LGATWDGLGV NFAIFSAHAT KVELCLFDET
GDTELERIEL PEYTDEVWHG YLPTARPGTV YGYRVHGPYE PDAGHRFNPN KLVIDPYAKQ
LIGNLRWGPE LFGYQLDHAD KDLSFDDRDS APLMLKCRVI DPAFTWGTSR KPEIPWERTI
FYEMHVKGFT KLHPLVPEAD RGTFAGLAHH DIPAYLRSLG ITSAELLPIH AFIDDSYLIE
KGLRNYWGYN SIGFFAPEPR YLKTPLATEF KTMVNQFHAN GIEVILDVVY NHTAEGNELG
PTLSFKGIDN ASYYRLMPEQ KRYYINDTGT GNTVNLSHQR VLQLVADSLR YWATEMRVDG
FRFDLATILA REPYGFDEGG SFLDACRQDP VLSSVKLIAE PWDIGPGGYQ VGQFPPGWAE
WNDKFRDTAR AFWKGDGGTL ADFAKRISGS GDLFNKRGRR PWASVNFITA HDGFNLNDLV
SYNDKHNEAN GEDNRDGHSN NHSWNCGVEG PTDDPQIIGL RERQKRNLLA TMLLSHGTPM
LLAGDEFGHS QGGSNNAYAQ DNETTWLDWM GIAPQGRALR EFTRKLIAMR KAFPILYRSR
FLVGSHNEDL GVKDVTWLAP SGEEMTTEQW TDDNARCFGM LLDGRAQETG VKRRGSDATL
LLIYNAHFDV VNFTLPAVPE GHNWLALIDT NQPDAQLQSF SFGHVYAVTG RSMLALGLSS
EQQPMRSLRH GLGALLDIAE APLPG
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